Analysis of interatomic Contacts of Structural Units in PDB entry:
4MJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MJH entry

There are 4 chains in PDB entry 4MJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 85PRO 170
B
 ILE 179PHE 185
C
 SER 86MET 169
D
 ILE 179PHE 185
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 4MJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
105 107Right-handed 310
Helix 2
2
C
105 107Right-handed 310
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There are 3 sheets in PDB entry 4MJH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
94 100anti-parallel
Strand 3
A
162 168anti-parallel
Strand 4
A
154 157anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 114first strand
Strand 2
A
117 128anti-parallel
Strand 3
A
133 143anti-parallel
Strand 4
C
133 143anti-parallel
Strand 5
C
117 128anti-parallel
Strand 6
C
109 114anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 89first strand
Strand 2
C
95 100anti-parallel
Strand 3
C
162 167anti-parallel
Strand 4
C
154 157anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il