Analysis of interatomic Contacts of Structural Units in PDB entry:
4MT1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MT1 entry

There is 1 chain in PDB entry 4MT1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 1040
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 4MT1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 8Right-handed alpha
Helix 2
2
A
8 30Right-handed alpha
Helix 3
3
A
53 61Right-handed alpha
Helix 4
4
A
61 67Right-handed alpha
Helix 5
5
A
99 113Right-handed alpha
Helix 6
6
A
119 126Right-handed alpha
Helix 7
7
A
148 160Right-handed alpha
Helix 8
8
A
187 194Right-handed alpha
Helix 9
9
A
197 209Right-handed alpha
Helix 10
10
A
240 246Right-handed alpha
Helix 11
11
A
260 263Right-handed alpha
Helix 12
12
A
297 312Right-handed alpha
Helix 13
13
A
313 315Right-handed 310
Helix 14
14
A
327 358Right-handed alpha
Helix 15
15
A
359 365Right-handed alpha
Helix 16
16
A
365 384Right-handed alpha
Helix 17
17
A
389 418Right-handed alpha
Helix 18
18
A
424 452Right-handed alpha
Helix 19
19
A
453 455Right-handed 310
Helix 20
20
A
459 485Right-handed alpha
Helix 21
21
A
487 493Right-handed alpha
Helix 22
22
A
509 534Right-handed alpha
Helix 23
23
A
534 555Right-handed alpha
Helix 24
24
A
580 596Right-handed alpha
Helix 25
25
A
638 654Right-handed alpha
Helix 26
26
A
687 705Right-handed alpha
Helix 27
27
A
729 736Right-handed alpha
Helix 28
28
A
739 752Right-handed alpha
Helix 29
29
A
781 786Right-handed alpha
Helix 30
30
A
833 848Right-handed alpha
Helix 31
31
A
859 864Right-handed alpha
Helix 32
32
A
869 889Right-handed alpha
Helix 33
33
A
892 899Right-handed alpha
Helix 34
34
A
901 920Right-handed alpha
Helix 35
35
A
932 963Right-handed alpha
Helix 36
36
A
966 993Right-handed alpha
Helix 37
37
A
993 998Right-handed alpha
Helix 38
38
A
1003 1038Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 4MT1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
87 94anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
812 816anti-parallel
Strand 6
A
819 821anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 175first strand
Strand 2
A
285 291anti-parallel
Strand 3
A
136 144anti-parallel
Strand 4
A
319 322anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 270first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
765 772parallel
Strand 4
A
754 760anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 217first strand
Strand 2
A
230 232anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
257 259anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 283first strand
Strand 2
A
276 279anti-parallel
Strand 3
A
601 610anti-parallel
Strand 4
A
615 626anti-parallel
Strand 5
A
568 574anti-parallel
Strand 6
A
658 662anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 679first strand
Strand 2
A
823 824anti-parallel
Strand 3
A
715 716anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 682first strand
Strand 2
A
852 853anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 728first strand
Strand 2
A
802 810anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
787 789first strand
Strand 2
A
795 797anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il