Analysis of interatomic Contacts of Structural Units in PDB entry:
4NB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NB6 entry

There are 2 chains in PDB entry 4NB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 245PHE 465
B
 SER 245GLN 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4NB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
245 263Right-handed alpha
Helix 2
2
A
267 274Right-handed alpha
Helix 3
3
A
280 290Right-handed alpha
Helix 4
4
A
291 316Right-handed alpha
Helix 5
5
A
324 345Right-handed alpha
Helix 6
6
A
363 371Right-handed 310
Helix 7
7
A
372 388Right-handed alpha
Helix 8
8
A
392 405Right-handed alpha
Helix 9
9
A
414 437Right-handed alpha
Helix 10
10
A
440 445Right-handed alpha
Helix 11
11
A
449 465Right-handed alpha
Helix 12
12
B
246 263Right-handed alpha
Helix 13
13
B
267 274Right-handed alpha
Helix 14
14
B
280 290Right-handed alpha
Helix 15
15
B
291 316Right-handed alpha
Helix 16
16
B
324 345Right-handed alpha
Helix 17
17
B
363 371Right-handed 310
Helix 18
18
B
372 388Right-handed alpha
Helix 19
19
B
392 405Right-handed alpha
Helix 20
20
B
414 436Right-handed alpha
Helix 21
21
B
440 445Right-handed alpha
Helix 22
22
B
449 466Right-handed alpha
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There are 2 sheets in PDB entry 4NB6. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
354 357anti-parallel
Strand 3
A
360 362anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
B
354 357anti-parallel
Strand 3
B
360 362anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il