Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4OM2 entry
There are 4 chains in PDB entry 4OM2
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
PHE 21 | GLN 132 |
B
|
ILE 23 | LEU 129 |
C
|
THR 22 | ALA 131 |
D
|
THR 22 | LEU 129 |
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There are 12
helices in PDB entry 4OM2. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 22 |
93 | Right-handed alpha |
Helix 2 |
2 | A
| 98 |
113 | Right-handed alpha |
Helix 3 |
3 | A
| 116 |
130 | Right-handed alpha |
Helix 4 |
4 | B
| 24 |
93 | Right-handed alpha |
Helix 5 |
5 | B
| 98 |
113 | Right-handed alpha |
Helix 6 |
6 | B
| 116 |
128 | Right-handed alpha |
Helix 7 |
7 | C
| 23 |
93 | Right-handed alpha |
Helix 8 |
8 | C
| 98 |
113 | Right-handed alpha |
Helix 9 |
9 | C
| 116 |
131 | Right-handed alpha |
Helix 10 |
10 | D
| 23 |
94 | Right-handed alpha |
Helix 11 |
11 | D
| 98 |
113 | Right-handed alpha |
Helix 12 |
12 | D
| 116 |
129 | Right-handed alpha |
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There are no sheets in PDB entry
4OM2
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il