Analysis of interatomic Contacts of Structural Units in PDB entry:
4OWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OWW entry

There are 4 chains in PDB entry 4OWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
T 2 T 7
A
ARG 35CYS 497
B
THR 5PRO 111
C
GLN 62ARG 100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4OWW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
46 62Right-handed alpha
Helix 2
AA2
A
67 80Right-handed alpha
Helix 3
AA3
A
82 100Right-handed alpha
Helix 4
AA4
A
100 115Right-handed alpha
Helix 5
AA5
A
119 134Right-handed alpha
Helix 6
AA6
A
135 137Right-handed 310
Helix 7
AA7
A
138 155Right-handed alpha
Helix 8
AA8
A
159 170Right-handed alpha
Helix 9
AA9
A
177 194Right-handed alpha
Helix 10
AB1
A
194 199Right-handed alpha
Helix 11
AB2
A
201 217Right-handed alpha
Helix 12
AB3
A
222 243Right-handed alpha
Helix 13
AB4
A
243 248Right-handed alpha
Helix 14
AB5
A
249 251Right-handed 310
Helix 15
AB6
A
252 260Right-handed alpha
Helix 16
AB7
A
264 277Right-handed alpha
Helix 17
AB8
A
278 281Right-handed 310
Helix 18
AB9
A
287 293Right-handed alpha
Helix 19
AC1
A
297 303Right-handed alpha
Helix 20
AC2
A
306 317Right-handed alpha
Helix 21
AC3
A
325 337Right-handed alpha
Helix 22
AC4
A
339 343Right-handed 310
Helix 23
AC5
A
344 356Right-handed alpha
Helix 24
AC6
A
360 365Right-handed alpha
Helix 25
AC7
A
370 381Right-handed alpha
Helix 26
AC8
A
384 397Right-handed alpha
Helix 27
AC9
A
408 423Right-handed alpha
Helix 28
AD1
A
426 444Right-handed alpha
Helix 29
AD2
A
445 447Right-handed 310
Helix 30
AD3
A
448 466Right-handed alpha
Helix 31
AD4
A
472 477Right-handed alpha
Helix 32
AD5
A
482 493Right-handed alpha
Helix 33
AD6
A
494 497Right-handed 310
Helix 34
AD7
B
6 10Right-handed 310
Helix 35
AD8
B
56 62Right-handed alpha
Helix 36
AD9
C
63 79Right-handed alpha
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There are 2 sheets in PDB entry 4OWW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
17 26first strand
Strand 2
B
38 45anti-parallel
Strand 3
B
48 55anti-parallel
Strand 4
B
81 97parallel
Strand 5
B
66 78anti-parallel
Strand 6
B
17 26anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
83 85first strand
Strand 2
C
94 96anti-parallel
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