Analysis of interatomic Contacts of Structural Units in PDB entry:
4RUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RUH entry

There are 2 chains in PDB entry 4RUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 4ASP 475
B
LEU 4ASP 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4RUH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 14Right-handed alpha
Helix 2
2
A
14 28Right-handed alpha
Helix 3
3
A
34 36Right-handed 310
Helix 4
4
A
37 55Right-handed alpha
Helix 5
5
A
106 110Right-handed 310
Helix 6
6
A
133 150Right-handed alpha
Helix 7
7
A
165 169Right-handed 310
Helix 8
8
A
172 181Right-handed alpha
Helix 9
9
A
229 233Right-handed alpha
Helix 10
10
A
238 248Right-handed alpha
Helix 11
11
A
283 290Right-handed alpha
Helix 12
12
A
300 310Right-handed alpha
Helix 13
13
A
349 369Right-handed alpha
Helix 14
14
A
391 406Right-handed alpha
Helix 15
15
A
419 429Right-handed alpha
Helix 16
16
A
453 472Right-handed alpha
Helix 17
17
B
5 14Right-handed alpha
Helix 18
18
B
14 28Right-handed alpha
Helix 19
19
B
34 36Right-handed 310
Helix 20
20
B
37 55Right-handed alpha
Helix 21
21
B
106 110Right-handed 310
Helix 22
22
B
133 150Right-handed alpha
Helix 23
23
B
165 169Right-handed 310
Helix 24
24
B
172 180Right-handed alpha
Helix 25
25
B
229 233Right-handed alpha
Helix 26
26
B
238 249Right-handed alpha
Helix 27
27
B
283 290Right-handed alpha
Helix 28
28
B
300 310Right-handed alpha
Helix 29
29
B
349 368Right-handed alpha
Helix 30
30
B
391 406Right-handed alpha
Helix 31
31
B
419 429Right-handed alpha
Helix 32
32
B
453 473Right-handed alpha
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There are 12 sheets in PDB entry 4RUH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 62first strand
Strand 2
A
80 85anti-parallel
Strand 3
A
157 163anti-parallel
Strand 4
A
93 99parallel
Strand 5
A
190 193parallel
Strand 6
A
431 434parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
66 68first strand
Strand 2
A
74 76anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
119 121first strand
Strand 2
A
124 126anti-parallel
Strand 3
A
450 452anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
385 386first strand
Strand 2
A
205 210anti-parallel
Strand 3
A
410 414parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
313 320first strand
Strand 2
A
335 344anti-parallel
Strand 3
A
212 221anti-parallel
Strand 4
A
373 382anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
227 228first strand
Strand 2
A
331 332anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
58 62first strand
Strand 2
B
80 85anti-parallel
Strand 3
B
157 163anti-parallel
Strand 4
B
93 99parallel
Strand 5
B
190 193parallel
Strand 6
B
431 434parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
66 68first strand
Strand 2
B
74 76anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
119 121first strand
Strand 2
B
124 126anti-parallel
Strand 3
B
450 452anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
385 386first strand
Strand 2
B
205 210anti-parallel
Strand 3
B
410 414parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
313 320first strand
Strand 2
B
335 344anti-parallel
Strand 3
B
212 221anti-parallel
Strand 4
B
373 382anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
227 228first strand
Strand 2
B
331 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il