Analysis of interatomic Contacts of Structural Units in PDB entry:
4RWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RWV entry

There are 3 chains in PDB entry 4RWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 297LYS 310
A
GLU 312LYS 539
B
PRO 140LYS 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4RWV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
302 311Right-handed alpha
Helix 2
2
A
314 331Right-handed alpha
Helix 3
3
A
334 338Right-handed 310
Helix 4
4
A
340 362Right-handed alpha
Helix 5
5
A
365 369Right-handed 310
Helix 6
6
A
370 398Right-handed alpha
Helix 7
7
A
413 420Right-handed alpha
Helix 8
8
A
421 442Right-handed alpha
Helix 9
9
A
444 457Right-handed alpha
Helix 10
10
A
466 489Right-handed alpha
Helix 11
11
A
494 523Right-handed alpha
Helix 12
12
A
530 538Right-handed alpha
Helix 13
13
B
144 152Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4RWV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
402 404first strand
Strand 2
A
410 412anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il