Analysis of interatomic Contacts of Structural Units in PDB entry:
4TQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TQ0 entry

There are 6 chains in PDB entry 4TQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4PRO 273
B
 PHE 10HIS 49
C
 ASP 4PRO 273
D
 PHE 10SER 46
E
 ASP 4THR 274
F
 PHE 10HIS 49
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4TQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
49 56Right-handed alpha
Helix 4
AA4
A
82 91Right-handed alpha
Helix 5
AA5
A
117 137Right-handed alpha
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
A
146 159Right-handed alpha
Helix 8
AA8
A
161 173Right-handed alpha
Helix 9
AA9
A
176 180Right-handed 310
Helix 10
AB1
A
214 223Right-handed alpha
Helix 11
AB2
A
224 227Right-handed 310
Helix 12
AB3
A
250 258Right-handed alpha
Helix 13
AB4
B
11 48Right-handed alpha
Helix 14
AB5
C
5 14Right-handed alpha
Helix 15
AB6
C
44 49Right-handed alpha
Helix 16
AB7
C
49 58Right-handed alpha
Helix 17
AB8
C
82 91Right-handed alpha
Helix 18
AB9
C
117 137Right-handed alpha
Helix 19
AC1
C
140 145Right-handed alpha
Helix 20
AC2
C
146 159Right-handed alpha
Helix 21
AC3
C
161 173Right-handed alpha
Helix 22
AC4
C
176 180Right-handed 310
Helix 23
AC5
C
214 223Right-handed alpha
Helix 24
AC6
C
224 227Right-handed 310
Helix 25
AC7
C
250 258Right-handed alpha
Helix 26
AC8
D
11 29Right-handed alpha
Helix 27
AC9
D
29 46Right-handed alpha
Helix 28
AD1
E
5 14Right-handed alpha
Helix 29
AD2
E
44 49Right-handed alpha
Helix 30
AD3
E
49 58Right-handed alpha
Helix 31
AD4
E
82 91Right-handed alpha
Helix 32
AD5
E
117 137Right-handed alpha
Helix 33
AD6
E
146 159Right-handed alpha
Helix 34
AD7
E
161 173Right-handed alpha
Helix 35
AD8
E
214 223Right-handed alpha
Helix 36
AD9
E
250 258Right-handed alpha
Helix 37
AE1
F
11 47Right-handed alpha
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There are 7 sheets in PDB entry 4TQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
98 104parallel
Strand 4
A
68 72anti-parallel
Strand 5
A
75 76anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
265 271parallel
Strand 3
A
236 239anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 40first strand
Strand 2
C
15 22anti-parallel
Strand 3
C
98 104parallel
Strand 4
C
68 72anti-parallel
Strand 5
C
75 76anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 191first strand
Strand 2
C
265 271parallel
Strand 3
C
236 239anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 40first strand
Strand 2
E
15 22anti-parallel
Strand 3
E
98 103parallel
Strand 4
E
69 72anti-parallel
Strand 5
E
75 76anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
187 191first strand
Strand 2
E
265 271parallel
Strand 3
E
236 239anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
206 207first strand
Strand 2
E
211 212anti-parallel
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