Analysis of interatomic Contacts of Structural Units in PDB entry:
4TTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TTV entry

There are 4 chains in PDB entry 4TTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 321PHE 723
B
SER 321PHE 723
C
SER 321PHE 723
D
SER 321PHE 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 4TTV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
322 330Right-handed alpha
Helix 2
AA2
A
346 368Right-handed alpha
Helix 3
AA3
A
380 386Right-handed alpha
Helix 4
AA4
A
387 392Right-handed alpha
Helix 5
AA5
A
393 396Right-handed 310
Helix 6
AA6
A
412 421Right-handed alpha
Helix 7
AA7
A
426 430Right-handed 310
Helix 8
AA8
A
471 491Right-handed alpha
Helix 9
AA9
A
508 527Right-handed alpha
Helix 10
AB1
A
566 571Right-handed alpha
Helix 11
AB2
A
596 609Right-handed alpha
Helix 12
AB3
A
627 630Right-handed 310
Helix 13
AB4
A
631 643Right-handed alpha
Helix 14
AB5
A
657 668Right-handed alpha
Helix 15
AB6
A
677 684Right-handed alpha
Helix 16
AB7
A
701 714Right-handed alpha
Helix 17
AB8
A
718 723Right-handed alpha
Helix 18
AB9
B
322 330Right-handed alpha
Helix 19
AC1
B
346 368Right-handed alpha
Helix 20
AC2
B
380 386Right-handed alpha
Helix 21
AC3
B
392 396Right-handed 310
Helix 22
AC4
B
412 421Right-handed alpha
Helix 23
AC5
B
426 430Right-handed 310
Helix 24
AC6
B
471 491Right-handed alpha
Helix 25
AC7
B
508 527Right-handed alpha
Helix 26
AC8
B
565 571Right-handed alpha
Helix 27
AC9
B
596 609Right-handed alpha
Helix 28
AD1
B
627 629Right-handed 310
Helix 29
AD2
B
630 643Right-handed alpha
Helix 30
AD3
B
657 668Right-handed alpha
Helix 31
AD4
B
677 684Right-handed alpha
Helix 32
AD5
B
701 714Right-handed alpha
Helix 33
AD6
B
718 723Right-handed alpha
Helix 34
AD7
C
322 330Right-handed alpha
Helix 35
AD8
C
346 368Right-handed alpha
Helix 36
AD9
C
380 387Right-handed alpha
Helix 37
AE1
C
392 396Right-handed 310
Helix 38
AE2
C
412 421Right-handed alpha
Helix 39
AE3
C
426 430Right-handed 310
Helix 40
AE4
C
445 449Right-handed 310
Helix 41
AE5
C
471 491Right-handed alpha
Helix 42
AE6
C
508 527Right-handed alpha
Helix 43
AE7
C
565 571Right-handed alpha
Helix 44
AE8
C
596 609Right-handed alpha
Helix 45
AE9
C
627 629Right-handed 310
Helix 46
AF1
C
630 643Right-handed alpha
Helix 47
AF2
C
657 668Right-handed alpha
Helix 48
AF3
C
677 684Right-handed alpha
Helix 49
AF4
C
701 714Right-handed alpha
Helix 50
AF5
C
718 723Right-handed alpha
Helix 51
AF6
D
322 330Right-handed alpha
Helix 52
AF7
D
346 368Right-handed alpha
Helix 53
AF8
D
380 386Right-handed alpha
Helix 54
AF9
D
392 396Right-handed 310
Helix 55
AG1
D
412 421Right-handed alpha
Helix 56
AG2
D
426 430Right-handed 310
Helix 57
AG3
D
445 449Right-handed 310
Helix 58
AG4
D
471 491Right-handed alpha
Helix 59
AG5
D
508 527Right-handed alpha
Helix 60
AG6
D
566 571Right-handed alpha
Helix 61
AG7
D
596 609Right-handed alpha
Helix 62
AG8
D
627 630Right-handed 310
Helix 63
AG9
D
631 643Right-handed alpha
Helix 64
AH1
D
657 668Right-handed alpha
Helix 65
AH2
D
677 684Right-handed alpha
Helix 66
AH3
D
701 714Right-handed alpha
Helix 67
AH4
D
718 723Right-handed alpha
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There are 20 sheets in PDB entry 4TTV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
333 334first strand
Strand 2
A
344 345anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
370 371first strand
Strand 2
A
432 436parallel
Strand 3
A
462 467anti-parallel
Strand 4
A
587 592anti-parallel
Strand 5
A
555 564anti-parallel
Strand 6
A
543 549anti-parallel
Strand 7
A
493 499anti-parallel
Strand 8
A
530 532parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
377 379first strand
Strand 2
A
404 408anti-parallel
Strand 3
A
398 401anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
439 441first strand
Strand 2
A
457 459anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
648 650first strand
Strand 2
A
621 625parallel
Strand 3
A
672 676parallel
Strand 4
A
685 690anti-parallel
Strand 5
A
695 700anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
333 334first strand
Strand 2
B
344 345anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
370 371first strand
Strand 2
B
432 436parallel
Strand 3
B
462 467anti-parallel
Strand 4
B
587 592anti-parallel
Strand 5
B
555 564anti-parallel
Strand 6
B
543 549anti-parallel
Strand 7
B
493 499anti-parallel
Strand 8
B
530 533parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
377 379first strand
Strand 2
B
404 408anti-parallel
Strand 3
B
398 401anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
439 441first strand
Strand 2
B
457 459anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
648 650first strand
Strand 2
B
621 625parallel
Strand 3
B
672 676parallel
Strand 4
B
685 690anti-parallel
Strand 5
B
695 700anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
333 334first strand
Strand 2
C
344 345anti-parallel
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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
370 371first strand
Strand 2
C
432 436parallel
Strand 3
C
462 467anti-parallel
Strand 4
C
587 592anti-parallel
Strand 5
C
555 564anti-parallel
Strand 6
C
543 549anti-parallel
Strand 7
C
493 499anti-parallel
Strand 8
C
530 533parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
377 379first strand
Strand 2
C
404 408anti-parallel
Strand 3
C
398 401anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
439 441first strand
Strand 2
C
457 459anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
648 650first strand
Strand 2
C
621 625parallel
Strand 3
C
672 676parallel
Strand 4
C
685 690anti-parallel
Strand 5
C
695 700anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
333 334first strand
Strand 2
D
344 345anti-parallel
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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
370 371first strand
Strand 2
D
432 436parallel
Strand 3
D
462 467anti-parallel
Strand 4
D
587 592anti-parallel
Strand 5
D
555 564anti-parallel
Strand 6
D
543 549anti-parallel
Strand 7
D
493 499anti-parallel
Strand 8
D
530 533parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
377 379first strand
Strand 2
D
404 408anti-parallel
Strand 3
D
398 401anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
439 441first strand
Strand 2
D
457 459anti-parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
648 650first strand
Strand 2
D
621 625parallel
Strand 3
D
672 676parallel
Strand 4
D
685 690anti-parallel
Strand 5
D
695 700anti-parallel
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