Analysis of interatomic Contacts of Structural Units in PDB entry:
4UE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UE0 entry

There are 3 chains in PDB entry 4UE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 420THR 534
B
THR 420THR 534
C
THR 420THR 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 4UE0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
470 475Right-handed alpha
Helix 2
2
B
470 475Right-handed alpha
Helix 3
3
C
470 475Right-handed alpha
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There are 6 sheets in PDB entry 4UE0. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
421 429first strand
Strand 2
A
432 442anti-parallel
Strand 3
A
447 453anti-parallel
Strand 4
A
527 533anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
464 468first strand
Strand 2
A
509 514anti-parallel
Strand 3
A
496 506anti-parallel
Strand 4
A
483 490anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
422 429first strand
Strand 2
B
432 441anti-parallel
Strand 3
B
447 453anti-parallel
Strand 4
B
527 533anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
464 468first strand
Strand 2
B
509 514anti-parallel
Strand 3
B
496 506anti-parallel
Strand 4
B
483 490anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
421 429first strand
Strand 2
C
432 442anti-parallel
Strand 3
C
447 453anti-parallel
Strand 4
C
527 533anti-parallel
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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
464 468first strand
Strand 2
C
509 514anti-parallel
Strand 3
C
496 506anti-parallel
Strand 4
C
483 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il