Analysis of interatomic Contacts of Structural Units in PDB entry:
4UFT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UFT entry

There are 2 chains in PDB entry 4UFT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
MET 1ALA 391
R
C 7 C 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4UFT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
2 11Right-handed alpha
Helix 2
2
B
12 15Right-handed 310
Helix 3
3
B
47 60Right-handed alpha
Helix 4
4
B
65 78Right-handed alpha
Helix 5
5
B
83 92Right-handed alpha
Helix 6
6
B
162 180Right-handed alpha
Helix 7
7
B
192 198Right-handed alpha
Helix 8
8
B
212 226Right-handed alpha
Helix 9
9
B
227 242Right-handed alpha
Helix 10
10
B
248 259Right-handed alpha
Helix 11
11
B
266 277Right-handed alpha
Helix 12
12
B
286 307Right-handed alpha
Helix 13
13
B
317 321Right-handed 310
Helix 14
14
B
329 340Right-handed alpha
Helix 15
15
B
358 373Right-handed alpha
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There is 1 sheet ( BA) in PDB entry 4UFT.

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
36 40first strand
Strand 2
B
100 104parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il