Analysis of interatomic Contacts of Structural Units in PDB entry:
4UIS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UIS entry

There are 5 chains in PDB entry 4UIS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 42UNK 688
B
UNK 69UNK 465
C
UNK 1UNK 222
D
UNK 5UNK 75
G
MET 1LYS 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 4UIS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
78 87Right-handed alpha
Helix 2
2
A
104 113Right-handed alpha
Helix 3
3
A
185 201Right-handed alpha
Helix 4
4
A
226 233Right-handed alpha
Helix 5
5
A
298 314Right-handed alpha
Helix 6
6
A
315 320Right-handed 310
Helix 7
7
A
337 349Right-handed alpha
Helix 8
8
A
392 408Right-handed alpha
Helix 9
9
A
426 432Right-handed alpha
Helix 10
10
A
459 464Right-handed alpha
Helix 11
11
A
473 478Right-handed alpha
Helix 12
12
A
483 503Right-handed alpha
Helix 13
13
A
514 527Right-handed alpha
Helix 14
14
A
538 542Right-handed 310
Helix 15
15
A
561 575Right-handed alpha
Helix 16
16
A
588 595Right-handed alpha
Helix 17
17
A
665 687Right-handed alpha
Helix 18
18
B
69 101Right-handed alpha
Helix 19
19
B
137 155Right-handed alpha
Helix 20
20
B
167 190Right-handed alpha
Helix 21
21
B
194 216Right-handed alpha
Helix 22
22
B
218 241Right-handed alpha
Helix 23
23
B
246 271Right-handed alpha
Helix 24
24
B
382 400Right-handed alpha
Helix 25
25
B
404 427Right-handed alpha
Helix 26
26
B
434 452Right-handed alpha
Helix 27
27
B
452 463Right-handed alpha
Helix 28
28
C
2 22Right-handed alpha
Helix 29
29
C
25 34Right-handed alpha
Helix 30
30
C
36 56Right-handed alpha
Helix 31
31
C
72 102Right-handed alpha
Helix 32
32
C
109 122Right-handed alpha
Helix 33
33
C
123 135Right-handed alpha
Helix 34
34
C
152 178Right-handed alpha
Helix 35
35
C
179 184Right-handed alpha
Helix 36
36
C
184 198Right-handed alpha
Helix 37
37
C
204 220Right-handed alpha
Helix 38
38
D
7 17Right-handed alpha
Helix 39
39
D
18 20Right-handed 310
Helix 40
40
D
21 31Right-handed alpha
Helix 41
41
D
43 72Right-handed alpha
Helix 42
42
D
73 75Right-handed 310
Helix 43
43
G
6 12Right-handed alpha
Helix 44
44
G
38 51Right-handed alpha
Helix 45
45
G
59 75Right-handed alpha
Helix 46
46
G
77 81Right-handed 310
Helix 47
47
G
83 91Right-handed alpha
Helix 48
48
G
92 106Right-handed alpha
Helix 49
49
G
107 113Right-handed alpha
Helix 50
50
G
114 123Right-handed alpha
Helix 51
51
G
125 134Right-handed alpha
Helix 52
52
G
142 156Right-handed alpha
Helix 53
53
G
158 162Right-handed 310
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There are 10 sheets in PDB entry 4UIS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, GA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
47 48first strand
Strand 2
A
180 183anti-parallel
Strand 3
A
121 124parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 54first strand
Strand 2
A
59 60anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
94 95first strand
Strand 2
A
69 73parallel
Strand 3
A
213 218anti-parallel
Strand 4
A
657 662anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
248 250first strand
Strand 2
A
649 651anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
253 255first strand
Strand 2
A
629 631anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
275 277first strand
Strand 2
A
324 326parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
280 281first strand
Strand 2
A
329 330parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
365 366first strand
Strand 2
A
441 442parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
605 606first strand
Strand 2
A
621 622anti-parallel
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There are 3 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
17 19first strand
Strand 2
G
25 27anti-parallel
Strand 3
G
31 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il