Analysis of interatomic Contacts of Structural Units in PDB entry:
4UU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UU5 entry

There are 3 chains in PDB entry 4UU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 246SER 335
B
MET 1393ALA 1401
B
GLU 1403ILE 1406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 4UU5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
287 293Right-handed alpha
Helix 2
2
A
313 323Right-handed alpha
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There are 2 sheets in PDB entry 4UU5. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
255 261first strand
Strand 2
A
326 333anti-parallel
Strand 3
A
300 304anti-parallel
Strand 4
A
307 308anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
277 283first strand
Strand 2
A
269 274anti-parallel
Strand 3
B
1403 1406anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il