Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for XXXX entry
There are 63 chains in PDB entry XXXX
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
U 1 | A 1795 |
B
|
LEU 9 | LEU 201 |
C
|
SER 6 | ALA 193 |
D
|
ARG 6 | PRO 163 |
E
|
GLY 75 | PRO 236 |
F
|
ILE 40 | ARG 225 |
G
|
LEU 6 | TYR 130 |
H
|
SER 6 | ARG 143 |
I
|
LYS 21 | VAL 116 |
J
|
ASP 9 | ARG 133 |
K
|
ASN 28 | SER 145 |
L
|
ARG 16 | ARG 145 |
M
|
ASN 5 | LYS 54 |
N
|
ILE 66 | LEU 149 |
O
|
ARG 67 | ALA 146 |
P
|
ARG 47 | GLY 117 |
Q
|
LEU 7 | ASN 319 |
R
|
VAL 4 | GLU 144 |
S
|
G 1 | A 9 |
S
|
C 11 | G 15 |
S
|
G 18 | C 25 |
S
|
C 27 | A 31 |
S
|
U 33 | U 33 |
S
|
A 35 | A 36 |
S
|
A 38 | A 38 |
S
|
U 41 | G 45 |
S
|
U 47 | C 48 |
S
|
U 50 | G 53 |
S
|
C 56 | G 57 |
S
|
U 59 | A 76 |
T
|
THR 14 | PRO 122 |
U
|
ALA 3 | ASN 50 |
V
|
GLU 8 | ALA 105 |
W
|
GLY 3 | TRP 120 |
X
|
THR 11 | THR 82 |
Y
|
ILE 4 | LEU 216 |
Z
|
GLY 2 | GLY 244 |
a
|
LYS 5 | GLY 366 |
b
|
GLN 5 | VAL 261 |
c
|
ALA 11 | ILE 247 |
d
|
ALA 10 | ASN 244 |
e
|
GLU 107 | ASP 219 |
f
|
THR 6 | LYS 184 |
g
|
ARG 4 | SER 168 |
h
|
SER 2 | HIS 152 |
i
|
PRO 7 | ASP 144 |
j
|
GLY 2 | ARG 193 |
k
|
VAL 7 | ALA 184 |
l
|
TYR 4 | LYS 153 |
m
|
SER 21 | ARG 141 |
n
|
ALA 2 | ALA 177 |
o
|
GLY 2 | ALA 117 |
p
|
GLN 7 | VAL 137 |
q
|
PHE 8 | THR 52 |
r
|
TYR 60 | ILE 139 |
s
|
SER 9 | GLY 124 |
t
|
THR 6 | ILE 147 |
u
|
THR 9 | ASN 87 |
v
|
ALA 2 | ALA 96 |
w
|
GLY 2 | ALA 53 |
x
|
VAL 2 | LEU 93 |
y
|
G 1 | U 118 |
z
|
A 1 | U 158 |
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There are no helices in PDB entry
XXXX
There are no sheets in PDB entry
XXXX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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