Analysis of interatomic Contacts of Structural Units in PDB entry:
4WNW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WNW entry

There are 2 chains in PDB entry 4WNW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 33ARG 497
B
 LEU 33ARG 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4WNW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 63Right-handed alpha
Helix 2
AA2
A
83 92Right-handed alpha
Helix 3
AA3
A
94 98Right-handed 310
Helix 4
AA4
A
104 109Right-handed 310
Helix 5
AA5
A
125 142Right-handed alpha
Helix 6
AA6
A
148 166Right-handed alpha
Helix 7
AA7
A
174 192Right-handed alpha
Helix 8
AA8
A
199 216Right-handed alpha
Helix 9
AA9
A
218 227Right-handed alpha
Helix 10
AB1
A
228 231Right-handed 310
Helix 11
AB2
A
233 240Right-handed alpha
Helix 12
AB3
A
241 262Right-handed alpha
Helix 13
AB4
A
270 282Right-handed alpha
Helix 14
AB5
A
291 323Right-handed alpha
Helix 15
AB6
A
324 339Right-handed alpha
Helix 16
AB7
A
346 352Right-handed 310
Helix 17
AB8
A
353 368Right-handed alpha
Helix 18
AB9
A
398 404Right-handed alpha
Helix 19
AC1
A
416 421Right-handed 310
Helix 20
AC2
A
445 464Right-handed alpha
Helix 21
AC3
B
43 48Right-handed 310
Helix 22
AC4
B
53 66Right-handed alpha
Helix 23
AC5
B
82 92Right-handed alpha
Helix 24
AC6
B
94 99Right-handed 310
Helix 25
AC7
B
104 109Right-handed 310
Helix 26
AC8
B
125 142Right-handed alpha
Helix 27
AC9
B
149 166Right-handed alpha
Helix 28
AD1
B
173 192Right-handed alpha
Helix 29
AD2
B
199 215Right-handed alpha
Helix 30
AD3
B
218 227Right-handed alpha
Helix 31
AD4
B
241 262Right-handed alpha
Helix 32
AD5
B
270 282Right-handed alpha
Helix 33
AD6
B
291 323Right-handed alpha
Helix 34
AD7
B
324 339Right-handed alpha
Helix 35
AD8
B
346 352Right-handed 310
Helix 36
AD9
B
353 368Right-handed alpha
Helix 37
AE1
B
398 404Right-handed alpha
Helix 38
AE2
B
416 421Right-handed 310
Helix 39
AE3
B
445 463Right-handed alpha
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There are 8 sheets in PDB entry 4WNW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
394 397parallel
Strand 4
A
376 377anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 384first strand
Strand 2
A
387 389anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 467first strand
Strand 2
A
493 495anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 481first strand
Strand 2
A
485 487anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
77 81anti-parallel
Strand 3
B
394 397parallel
Strand 4
B
376 377anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
382 384first strand
Strand 2
B
387 389anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 467first strand
Strand 2
B
493 495anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 481first strand
Strand 2
B
485 487anti-parallel
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