Analysis of interatomic Contacts of Structural Units in PDB entry:
4WTH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WTH entry

There are 2 chains in PDB entry 4WTH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1GLY 403
B
 LYS 1SER 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4WTH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 32Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
66 73Right-handed alpha
Helix 4
AA4
A
82 87Right-handed alpha
Helix 5
AA5
A
90 97Right-handed alpha
Helix 6
AA6
A
131 141Right-handed alpha
Helix 7
AA7
A
153 164Right-handed alpha
Helix 8
AA8
A
185 201Right-handed alpha
Helix 9
AA9
A
209 219Right-handed alpha
Helix 10
AB1
A
228 230Right-handed 310
Helix 11
AB2
A
231 239Right-handed alpha
Helix 12
AB3
A
272 283Right-handed alpha
Helix 13
AB4
A
286 297Right-handed alpha
Helix 14
AB5
A
304 311Right-handed alpha
Helix 15
AB6
A
314 327Right-handed alpha
Helix 16
AB7
A
335 352Right-handed alpha
Helix 17
AB8
A
356 397Right-handed alpha
Helix 18
AB9
B
16 32Right-handed alpha
Helix 19
AC1
B
42 52Right-handed alpha
Helix 20
AC2
B
66 73Right-handed alpha
Helix 21
AC3
B
82 87Right-handed alpha
Helix 22
AC4
B
90 96Right-handed alpha
Helix 23
AC5
B
131 141Right-handed alpha
Helix 24
AC6
B
153 164Right-handed alpha
Helix 25
AC7
B
185 201Right-handed alpha
Helix 26
AC8
B
209 219Right-handed alpha
Helix 27
AC9
B
228 230Right-handed 310
Helix 28
AD1
B
231 239Right-handed alpha
Helix 29
AD2
B
272 283Right-handed alpha
Helix 30
AD3
B
286 297Right-handed alpha
Helix 31
AD4
B
304 311Right-handed alpha
Helix 32
AD5
B
314 327Right-handed alpha
Helix 33
AD6
B
335 352Right-handed alpha
Helix 34
AD7
B
356 397Right-handed alpha
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There are 10 sheets in PDB entry 4WTH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
6 10parallel
Strand 3
A
59 63parallel
Strand 4
A
258 266anti-parallel
Strand 5
A
106 111anti-parallel
Strand 6
A
301 302anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
6 10parallel
Strand 3
A
59 63parallel
Strand 4
A
258 266anti-parallel
Strand 5
A
328 329parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
222 227parallel
Strand 3
A
114 118anti-parallel
Strand 4
A
242 245anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
175 182anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
7 10parallel
Strand 3
B
59 63parallel
Strand 4
B
258 266anti-parallel
Strand 5
B
106 111anti-parallel
Strand 6
B
301 302anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
7 10parallel
Strand 3
B
59 63parallel
Strand 4
B
258 266anti-parallel
Strand 5
B
328 329parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
102 103anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
222 227parallel
Strand 3
B
114 118anti-parallel
Strand 4
B
242 245anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 172first strand
Strand 2
B
175 182anti-parallel
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