Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4X7C entry
There are 4 chains in PDB entry 4X7C
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
SER 224 | MET 530 |
B
|
SER 224 | MET 530 |
C
|
ASP 1 | SER 119 |
D
|
ASP 1 | SER 120 |
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There are 11
helices in PDB entry 4X7C. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
AA1 | A
| 279 |
283 | Right-handed 310 |
Helix 2 |
AA2 | A
| 359 |
362 | Right-handed 310 |
Helix 3 |
AA3 | A
| 454 |
465 | Right-handed alpha |
Helix 4 |
AA4 | B
| 233 |
237 | Right-handed 310 |
Helix 5 |
AA5 | B
| 279 |
283 | Right-handed 310 |
Helix 6 |
AA6 | B
| 359 |
362 | Right-handed 310 |
Helix 7 |
AA7 | B
| 454 |
465 | Right-handed alpha |
Helix 8 |
AA8 | C
| 61 |
64 | Right-handed 310 |
Helix 9 |
AA9 | C
| 86 |
90 | Right-handed 310 |
Helix 10 |
AB1 | D
| 61 |
64 | Right-handed 310 |
Helix 11 |
AB2 | D
| 86 |
90 | Right-handed 310 |
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There are
52 sheets in PDB entry 4X7C. Click on sheet of
interest to get list of strands forming it:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
13,
14,
15,
16,
17,
18,
19,
20,
21,
22,
23,
24,
25,
26,
27,
28,
29,
30,
31,
32,
33,
34,
35,
36,
37,
38,
39,
40,
41,
42,
43,
44,
45,
46,
47,
48,
49,
50,
51,
52,
There are 1
strands in 1 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 248 |
251 | first strand |
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There are 1
strands in 2 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 286 |
292 | first strand |
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There are 1
strands in 3 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 298 |
303 | first strand |
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There are 1
strands in 4 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 329 |
337 | first strand |
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There are 1
strands in 5 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 344 |
352 | first strand |
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There are 1
strands in 6 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 364 |
369 | first strand |
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There are 1
strands in 7 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 381 |
389 | first strand |
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There are 1
strands in 8 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 429 |
437 | first strand |
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There are 1
strands in 9 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 440 |
443 | first strand |
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There are 1
strands in 10 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 448 |
451 | first strand |
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There are 1
strands in 11 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 472 |
479 | first strand |
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There are 1
strands in 12 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 484 |
492 | first strand |
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There are 1
strands in 13 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 496 |
500 | first strand |
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There are 1
strands in 14 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 505 |
506 | first strand |
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There are 1
strands in 15 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 514 |
521 | first strand |
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There are 1
strands in 16 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 248 |
252 | first strand |
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There are 1
strands in 17 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 286 |
291 | first strand |
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There are 1
strands in 18 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 298 |
303 | first strand |
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There are 1
strands in 19 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 329 |
337 | first strand |
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There are 1
strands in 20 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 344 |
352 | first strand |
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There are 1
strands in 21 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 364 |
369 | first strand |
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There are 1
strands in 22 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 381 |
389 | first strand |
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There are 1
strands in 23 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 429 |
437 | first strand |
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There are 1
strands in 24 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 440 |
443 | first strand |
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There are 1
strands in 25 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 448 |
451 | first strand |
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There are 1
strands in 26 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 472 |
478 | first strand |
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There are 1
strands in 27 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 485 |
492 | first strand |
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There are 1
strands in 28 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 496 |
500 | first strand |
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There are 1
strands in 29 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 505 |
506 | first strand |
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There are 1
strands in 30 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
B
| 514 |
521 | first strand |
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There are 1
strands in 31 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 2 |
7 | first strand |
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There are 1
strands in 32 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 10 |
12 | first strand |
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There are 1
strands in 33 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 18 |
26 | first strand |
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There are 1
strands in 34 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 31 |
39 | first strand |
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There are 1
strands in 35 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 46 |
52 | first strand |
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There are 1
strands in 36 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 57 |
59 | first strand |
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There are 1
strands in 37 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 67 |
70 | first strand |
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There are 1
strands in 38 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 77 |
82 | first strand |
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There are 1
strands in 39 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 91 |
100 | first strand |
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There are 1
strands in 40 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 107 |
110 | first strand |
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There are 1
strands in 41 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
C
| 114 |
118 | first strand |
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There are 1
strands in 42 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 2 |
7 | first strand |
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There are 1
strands in 43 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 10 |
12 | first strand |
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There are 1
strands in 44 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 18 |
26 | first strand |
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There are 1
strands in 45 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 31 |
39 | first strand |
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There are 1
strands in 46 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 46 |
52 | first strand |
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There are 1
strands in 47 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 57 |
59 | first strand |
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There are 1
strands in 48 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 67 |
70 | first strand |
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There are 1
strands in 49 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 77 |
82 | first strand |
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There are 1
strands in 50 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 91 |
100 | first strand |
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There are 1
strands in 51 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 107 |
110 | first strand |
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There are 1
strands in 52 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
D
| 114 |
118 | first strand |
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Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il