Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z7Z entry

There are 4 chains in PDB entry 4Z7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 111ASN 305
C
 C 1 T 28
D
 A 1 A 16
D
 G 18 G 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 4Z7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 120Right-handed alpha
Helix 2
AA2
A
142 149Right-handed alpha
Helix 3
AA3
A
158 166Right-handed alpha
Helix 4
AA4
A
174 179Right-handed 310
Helix 5
AA5
A
180 186Right-handed alpha
Helix 6
AA6
A
199 203Right-handed 310
Helix 7
AA7
A
204 223Right-handed alpha
Helix 8
AA8
A
231 243Right-handed alpha
Helix 9
AA9
A
281 305Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 4Z7Z.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
134 138parallel
Strand 3
A
226 230parallel
Strand 4
A
265 269parallel
Strand 5
A
253 254anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il