Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z96 entry

There are 2 chains in PDB entry 4Z96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 555ASN 1083
C
 ASN 1108LYS 1113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4Z96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
560 562Right-handed 310
Helix 2
AA2
A
573 576Right-handed 310
Helix 3
AA3
A
601 614Right-handed alpha
Helix 4
AA4
A
616 618Right-handed 310
Helix 5
AA5
A
642 646Right-handed 310
Helix 6
AA6
A
647 653Right-handed alpha
Helix 7
AA7
A
666 672Right-handed alpha
Helix 8
AA8
A
712 715Right-handed 310
Helix 9
AA9
A
716 725Right-handed alpha
Helix 10
AB1
A
752 757Right-handed alpha
Helix 11
AB2
A
772 778Right-handed 310
Helix 12
AB3
A
782 792Right-handed alpha
Helix 13
AB4
A
818 829Right-handed alpha
Helix 14
AB5
A
833 835Right-handed 310
Helix 15
AB6
A
860 865Right-handed alpha
Helix 16
AB7
A
884 889Right-handed alpha
Helix 17
AB8
A
917 927Right-handed alpha
Helix 18
AB9
A
958 962Right-handed 310
Helix 19
AC1
A
976 980Right-handed 310
Helix 20
AC2
A
1016 1029Right-handed alpha
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There are 5 sheets in PDB entry 4Z96. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 597first strand
Strand 2
A
564 571anti-parallel
Strand 3
A
658 664parallel
Strand 4
A
620 627anti-parallel
Strand 5
A
633 635anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 708first strand
Strand 2
A
684 693anti-parallel
Strand 3
A
765 770parallel
Strand 4
A
732 739anti-parallel
Strand 5
A
742 745anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 814first strand
Strand 2
A
793 800anti-parallel
Strand 3
A
874 880parallel
Strand 4
A
837 840anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
905 910first strand
Strand 2
A
894 899anti-parallel
Strand 3
A
969 974parallel
Strand 4
A
939 945anti-parallel
Strand 5
A
948 952anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1002 1010first strand
Strand 2
A
989 995anti-parallel
Strand 3
A
1076 1080parallel
Strand 4
A
1039 1044anti-parallel
Strand 5
A
1047 1051anti-parallel
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