Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZZX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZZX entry

There are 2 chains in PDB entry 4ZZX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 231TRP 583
B
 GLN 233TRP 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 4ZZX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
235 246Right-handed alpha
Helix 2
2
A
247 258Right-handed alpha
Helix 3
3
A
266 270Right-handed 310
Helix 4
4
A
271 291Right-handed alpha
Helix 5
5
A
295 309Right-handed alpha
Helix 6
6
A
323 347Right-handed alpha
Helix 7
7
A
356 366Right-handed alpha
Helix 8
8
A
376 389Right-handed alpha
Helix 9
9
A
411 416Right-handed alpha
Helix 10
10
A
431 433Right-handed 310
Helix 11
11
A
434 442Right-handed alpha
Helix 12
12
A
451 455Right-handed 310
Helix 13
13
A
466 472Right-handed alpha
Helix 14
14
A
473 475Right-handed 310
Helix 15
15
A
504 509Right-handed 310
Helix 16
16
A
525 528Right-handed 310
Helix 17
17
A
563 565Right-handed 310
Helix 18
18
B
235 246Right-handed alpha
Helix 19
19
B
247 258Right-handed alpha
Helix 20
20
B
266 270Right-handed 310
Helix 21
21
B
271 291Right-handed alpha
Helix 22
22
B
295 309Right-handed alpha
Helix 23
23
B
323 347Right-handed alpha
Helix 24
24
B
356 365Right-handed alpha
Helix 25
25
B
376 389Right-handed alpha
Helix 26
26
B
411 416Right-handed alpha
Helix 27
27
B
431 433Right-handed 310
Helix 28
28
B
434 442Right-handed alpha
Helix 29
29
B
451 455Right-handed 310
Helix 30
30
B
466 472Right-handed alpha
Helix 31
31
B
473 475Right-handed 310
Helix 32
32
B
504 509Right-handed 310
Helix 33
33
B
525 528Right-handed 310
Helix 34
34
B
563 565Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 4ZZX. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 371first strand
Strand 2
A
397 409anti-parallel
Strand 3
A
567 579anti-parallel
Strand 4
A
482 491anti-parallel
Strand 5
A
423 429anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 463first strand
Strand 2
A
558 561anti-parallel
Strand 3
A
514 517anti-parallel
Strand 4
A
495 498parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
519 523anti-parallel
Strand 3
A
554 556parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 531first strand
Strand 2
A
534 536anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 371first strand
Strand 2
B
397 409anti-parallel
Strand 3
B
567 579anti-parallel
Strand 4
B
482 491anti-parallel
Strand 5
B
423 429anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
461 463first strand
Strand 2
B
558 561anti-parallel
Strand 3
B
514 517anti-parallel
Strand 4
B
495 498parallel
Back to list of sheets
Back to top of page

There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
541 543first strand
Strand 2
B
519 523anti-parallel
Strand 3
B
554 556parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
529 531first strand
Strand 2
B
534 536anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il