Analysis of interatomic Contacts of Structural Units in PDB entry:
5A36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A36 entry

There are 2 chains in PDB entry 5A36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 19ALA 257
B
ASP 33PHE 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5A36. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 30Right-handed alpha
Helix 2
2
A
34 53Right-handed alpha
Helix 3
3
A
54 56Right-handed 310
Helix 4
4
A
69 81Right-handed alpha
Helix 5
5
A
92 110Right-handed alpha
Helix 6
6
A
118 124Right-handed alpha
Helix 7
7
A
126 143Right-handed alpha
Helix 8
8
A
153 166Right-handed alpha
Helix 9
9
A
177 181Right-handed 310
Helix 10
10
A
183 194Right-handed alpha
Helix 11
11
A
195 198Right-handed 310
Helix 12
12
A
199 203Right-handed 310
Helix 13
13
A
207 224Right-handed alpha
Helix 14
14
A
230 237Right-handed alpha
Helix 15
15
A
241 257Right-handed alpha
Helix 16
16
B
34 53Right-handed alpha
Helix 17
17
B
54 56Right-handed 310
Helix 18
18
B
69 81Right-handed alpha
Helix 19
19
B
92 110Right-handed alpha
Helix 20
20
B
118 124Right-handed alpha
Helix 21
21
B
126 143Right-handed alpha
Helix 22
22
B
153 166Right-handed alpha
Helix 23
23
B
177 181Right-handed 310
Helix 24
24
B
183 194Right-handed alpha
Helix 25
25
B
195 198Right-handed 310
Helix 26
26
B
199 203Right-handed 310
Helix 27
27
B
207 223Right-handed alpha
Helix 28
28
B
230 237Right-handed alpha
Helix 29
29
B
241 256Right-handed alpha
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There are 2 sheets in PDB entry 5A36. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 152anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
147 148first strand
Strand 2
B
151 152anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il