Analysis of interatomic Contacts of Structural Units in PDB entry:
5B25


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B25 entry

There are 4 chains in PDB entry 5B25 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 149ASN 506
B
 THR 149GLY 503
C
 THR 149GLY 503
D
 THR 149THR 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 5B25. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
151 159Right-handed alpha
Helix 2
AA2
A
167 175Right-handed alpha
Helix 3
AA3
A
178 191Right-handed alpha
Helix 4
AA4
A
192 197Right-handed alpha
Helix 5
AA5
A
200 217Right-handed alpha
Helix 6
AA6
A
224 243Right-handed alpha
Helix 7
AA7
A
244 248Right-handed 310
Helix 8
AA8
A
249 263Right-handed alpha
Helix 9
AA9
A
271 278Right-handed alpha
Helix 10
AB1
A
280 287Right-handed alpha
Helix 11
AB2
A
290 304Right-handed alpha
Helix 12
AB3
A
305 310Right-handed 310
Helix 13
AB4
A
316 333Right-handed alpha
Helix 14
AB5
A
334 337Right-handed 310
Helix 15
AB6
A
338 352Right-handed alpha
Helix 16
AB7
A
357 371Right-handed alpha
Helix 17
AB8
A
372 376Right-handed 310
Helix 18
AB9
A
377 402Right-handed alpha
Helix 19
AC1
A
416 428Right-handed alpha
Helix 20
AC2
A
428 443Right-handed alpha
Helix 21
AC3
A
477 502Right-handed alpha
Helix 22
AC4
B
151 159Right-handed alpha
Helix 23
AC5
B
167 175Right-handed alpha
Helix 24
AC6
B
178 191Right-handed alpha
Helix 25
AC7
B
192 197Right-handed alpha
Helix 26
AC8
B
200 217Right-handed alpha
Helix 27
AC9
B
224 243Right-handed alpha
Helix 28
AD1
B
244 248Right-handed 310
Helix 29
AD2
B
249 263Right-handed alpha
Helix 30
AD3
B
271 278Right-handed alpha
Helix 31
AD4
B
280 287Right-handed alpha
Helix 32
AD5
B
290 304Right-handed alpha
Helix 33
AD6
B
305 310Right-handed 310
Helix 34
AD7
B
316 333Right-handed alpha
Helix 35
AD8
B
334 337Right-handed 310
Helix 36
AD9
B
338 352Right-handed alpha
Helix 37
AE1
B
357 371Right-handed alpha
Helix 38
AE2
B
372 376Right-handed 310
Helix 39
AE3
B
377 402Right-handed alpha
Helix 40
AE4
B
416 428Right-handed alpha
Helix 41
AE5
B
428 443Right-handed alpha
Helix 42
AE6
B
476 502Right-handed alpha
Helix 43
AE7
C
151 159Right-handed alpha
Helix 44
AE8
C
167 175Right-handed alpha
Helix 45
AE9
C
178 191Right-handed alpha
Helix 46
AF1
C
192 197Right-handed alpha
Helix 47
AF2
C
200 217Right-handed alpha
Helix 48
AF3
C
224 243Right-handed alpha
Helix 49
AF4
C
244 248Right-handed 310
Helix 50
AF5
C
249 263Right-handed alpha
Helix 51
AF6
C
271 278Right-handed alpha
Helix 52
AF7
C
280 287Right-handed alpha
Helix 53
AF8
C
290 304Right-handed alpha
Helix 54
AF9
C
305 310Right-handed 310
Helix 55
AG1
C
316 333Right-handed alpha
Helix 56
AG2
C
334 337Right-handed 310
Helix 57
AG3
C
338 352Right-handed alpha
Helix 58
AG4
C
357 371Right-handed alpha
Helix 59
AG5
C
372 376Right-handed 310
Helix 60
AG6
C
377 402Right-handed alpha
Helix 61
AG7
C
416 428Right-handed alpha
Helix 62
AG8
C
428 443Right-handed alpha
Helix 63
AG9
C
476 502Right-handed alpha
Helix 64
AH1
D
151 159Right-handed alpha
Helix 65
AH2
D
167 175Right-handed alpha
Helix 66
AH3
D
178 191Right-handed alpha
Helix 67
AH4
D
192 197Right-handed alpha
Helix 68
AH5
D
200 217Right-handed alpha
Helix 69
AH6
D
224 243Right-handed alpha
Helix 70
AH7
D
244 248Right-handed 310
Helix 71
AH8
D
249 263Right-handed alpha
Helix 72
AH9
D
271 278Right-handed alpha
Helix 73
AI1
D
280 287Right-handed alpha
Helix 74
AI2
D
290 304Right-handed alpha
Helix 75
AI3
D
305 310Right-handed 310
Helix 76
AI4
D
316 333Right-handed alpha
Helix 77
AI5
D
334 337Right-handed 310
Helix 78
AI6
D
338 352Right-handed alpha
Helix 79
AI7
D
357 371Right-handed alpha
Helix 80
AI8
D
372 376Right-handed 310
Helix 81
AI9
D
377 402Right-handed alpha
Helix 82
AJ1
D
416 428Right-handed alpha
Helix 83
AJ2
D
428 443Right-handed alpha
Helix 84
AJ3
D
477 501Right-handed alpha
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There are no sheets in PDB entry 5B25
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