Analysis of interatomic Contacts of Structural Units in PDB entry:
5BZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BZZ entry

There are 4 chains in PDB entry 5BZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 14VAL 351
B
ARG 14VAL 351
C
ARG 14VAL 351
D
ARG 14VAL 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5BZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
49 62Right-handed alpha
Helix 2
AA2
A
77 81Right-handed 310
Helix 3
AA3
A
97 99Right-handed 310
Helix 4
AA4
A
100 113Right-handed alpha
Helix 5
AA5
A
128 142Right-handed alpha
Helix 6
AA6
A
147 160Right-handed alpha
Helix 7
AA7
A
168 184Right-handed alpha
Helix 8
AA8
A
278 280Right-handed 310
Helix 9
AA9
A
323 325Right-handed 310
Helix 10
AB1
A
327 331Right-handed 310
Helix 11
AB2
B
50 62Right-handed alpha
Helix 12
AB3
B
77 81Right-handed 310
Helix 13
AB4
B
97 99Right-handed 310
Helix 14
AB5
B
100 113Right-handed alpha
Helix 15
AB6
B
128 142Right-handed alpha
Helix 16
AB7
B
147 160Right-handed alpha
Helix 17
AB8
B
168 184Right-handed alpha
Helix 18
AB9
B
278 280Right-handed 310
Helix 19
AC1
B
323 325Right-handed 310
Helix 20
AC2
B
327 331Right-handed 310
Helix 21
AC3
C
50 62Right-handed alpha
Helix 22
AC4
C
77 81Right-handed 310
Helix 23
AC5
C
97 99Right-handed 310
Helix 24
AC6
C
100 113Right-handed alpha
Helix 25
AC7
C
128 142Right-handed alpha
Helix 26
AC8
C
147 160Right-handed alpha
Helix 27
AC9
C
168 184Right-handed alpha
Helix 28
AD1
C
278 280Right-handed 310
Helix 29
AD2
C
323 325Right-handed 310
Helix 30
AD3
C
327 331Right-handed 310
Helix 31
AD4
D
49 62Right-handed alpha
Helix 32
AD5
D
77 81Right-handed 310
Helix 33
AD6
D
97 99Right-handed 310
Helix 34
AD7
D
100 113Right-handed alpha
Helix 35
AD8
D
128 142Right-handed alpha
Helix 36
AD9
D
147 160Right-handed alpha
Helix 37
AE1
D
168 185Right-handed alpha
Helix 38
AE2
D
278 280Right-handed 310
Helix 39
AE3
D
323 325Right-handed 310
Helix 40
AE4
D
327 331Right-handed 310
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There are 14 sheets in PDB entry 5BZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 29first strand
Strand 2
A
32 35anti-parallel
Strand 3
A
119 123parallel
Strand 4
A
65 71parallel
Strand 5
A
85 90parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
233 235first strand
Strand 2
A
238 250anti-parallel
Strand 3
A
192 200anti-parallel
Strand 4
A
342 349anti-parallel
Strand 5
A
316 321anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 226first strand
Strand 2
A
213 219anti-parallel
Strand 3
A
252 259anti-parallel
Strand 4
A
268 276anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 29first strand
Strand 2
B
32 35anti-parallel
Strand 3
B
119 123parallel
Strand 4
B
65 71parallel
Strand 5
B
85 90parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
38 39first strand
Strand 2
B
48 49parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
233 235first strand
Strand 2
B
238 250anti-parallel
Strand 3
B
192 200anti-parallel
Strand 4
B
342 349anti-parallel
Strand 5
B
316 321anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
222 226first strand
Strand 2
B
213 219anti-parallel
Strand 3
B
252 259anti-parallel
Strand 4
B
268 276anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
25 29first strand
Strand 2
C
32 35anti-parallel
Strand 3
C
119 123parallel
Strand 4
C
65 71parallel
Strand 5
C
85 90parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
38 39first strand
Strand 2
C
48 49parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
233 235first strand
Strand 2
C
238 250anti-parallel
Strand 3
C
192 200anti-parallel
Strand 4
C
342 349anti-parallel
Strand 5
C
316 321anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
222 226first strand
Strand 2
C
213 219anti-parallel
Strand 3
C
252 259anti-parallel
Strand 4
C
268 276anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
25 29first strand
Strand 2
D
32 35anti-parallel
Strand 3
D
119 123parallel
Strand 4
D
65 71parallel
Strand 5
D
85 90parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
233 235first strand
Strand 2
D
238 250anti-parallel
Strand 3
D
192 200anti-parallel
Strand 4
D
342 349anti-parallel
Strand 5
D
316 321anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
222 226first strand
Strand 2
D
213 219anti-parallel
Strand 3
D
252 259anti-parallel
Strand 4
D
268 276anti-parallel
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