Analysis of interatomic Contacts of Structural Units in PDB entry:
5CEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CEV entry

There are 6 chains in PDB entry 5CEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2MET 299
B
 LYS 2MET 299
C
 LYS 2MET 299
D
 LYS 2MET 299
E
 LYS 2MET 299
F
 LYS 2MET 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 5CEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 29Right-handed 310
Helix 2
2
A
32 38Right-handed alpha
Helix 3
3
A
57 59Right-handed 310
Helix 4
4
A
68 87Right-handed alpha
Helix 5
5
A
99 112Right-handed 310
Helix 6
6
A
138 140Right-handed 310
Helix 7
7
A
142 147Right-handed alpha
Helix 8
8
A
152 155Right-handed alpha
Helix 9
9
A
157 159Right-handed 310
Helix 10
10
A
166 168Right-handed 310
Helix 11
11
A
179 188Right-handed alpha
Helix 12
12
A
195 215Right-handed alpha
Helix 13
13
A
227 229Right-handed 310
Helix 14
14
A
248 261Right-handed alpha
Helix 15
15
A
274 276Right-handed 310
Helix 16
16
A
281 293Right-handed alpha
Helix 17
17
B
20 29Right-handed 310
Helix 18
18
B
32 38Right-handed alpha
Helix 19
19
B
68 87Right-handed alpha
Helix 20
20
B
99 112Right-handed 310
Helix 21
21
B
138 140Right-handed 310
Helix 22
22
B
142 146Right-handed alpha
Helix 23
23
B
152 155Right-handed alpha
Helix 24
24
B
157 159Right-handed 310
Helix 25
25
B
166 168Right-handed 310
Helix 26
26
B
179 188Right-handed alpha
Helix 27
27
B
195 201Right-handed alpha
Helix 28
28
B
203 215Right-handed alpha
Helix 29
29
B
227 229Right-handed 310
Helix 30
30
B
248 261Right-handed alpha
Helix 31
31
B
274 276Right-handed 310
Helix 32
32
B
281 293Right-handed alpha
Helix 33
33
C
20 29Right-handed 310
Helix 34
34
C
32 37Right-handed alpha
Helix 35
35
C
57 59Right-handed 310
Helix 36
36
C
68 87Right-handed alpha
Helix 37
37
C
99 112Right-handed 310
Helix 38
38
C
138 140Right-handed 310
Helix 39
39
C
142 147Right-handed alpha
Helix 40
40
C
152 155Right-handed alpha
Helix 41
41
C
157 159Right-handed 310
Helix 42
42
C
166 168Right-handed 310
Helix 43
43
C
179 188Right-handed alpha
Helix 44
44
C
195 201Right-handed alpha
Helix 45
45
C
203 215Right-handed alpha
Helix 46
46
C
227 229Right-handed 310
Helix 47
47
C
248 261Right-handed alpha
Helix 48
48
C
274 276Right-handed 310
Helix 49
49
C
281 293Right-handed alpha
Helix 50
50
D
20 29Right-handed 310
Helix 51
51
D
32 38Right-handed alpha
Helix 52
52
D
57 59Right-handed 310
Helix 53
53
D
68 87Right-handed alpha
Helix 54
54
D
99 112Right-handed 310
Helix 55
55
D
138 140Right-handed 310
Helix 56
56
D
142 147Right-handed alpha
Helix 57
57
D
152 155Right-handed alpha
Helix 58
58
D
157 159Right-handed 310
Helix 59
59
D
166 168Right-handed 310
Helix 60
60
D
179 188Right-handed alpha
Helix 61
61
D
195 201Right-handed alpha
Helix 62
62
D
203 215Right-handed alpha
Helix 63
63
D
227 229Right-handed 310
Helix 64
64
D
248 261Right-handed alpha
Helix 65
65
D
274 276Right-handed 310
Helix 66
66
D
281 293Right-handed alpha
Helix 67
67
E
20 29Right-handed 310
Helix 68
68
E
32 37Right-handed alpha
Helix 69
69
E
68 87Right-handed alpha
Helix 70
70
E
99 112Right-handed 310
Helix 71
71
E
138 140Right-handed 310
Helix 72
72
E
142 147Right-handed alpha
Helix 73
73
E
152 155Right-handed alpha
Helix 74
74
E
157 159Right-handed 310
Helix 75
75
E
166 168Right-handed 310
Helix 76
76
E
179 188Right-handed alpha
Helix 77
77
E
195 201Right-handed alpha
Helix 78
78
E
203 215Right-handed alpha
Helix 79
79
E
227 229Right-handed 310
Helix 80
80
E
248 261Right-handed alpha
Helix 81
81
E
274 276Right-handed 310
Helix 82
82
E
281 293Right-handed alpha
Helix 83
83
F
20 29Right-handed 310
Helix 84
84
F
32 38Right-handed alpha
Helix 85
85
F
57 59Right-handed 310
Helix 86
86
F
68 87Right-handed alpha
Helix 87
87
F
99 112Right-handed 310
Helix 88
88
F
138 140Right-handed 310
Helix 89
89
F
142 147Right-handed alpha
Helix 90
90
F
152 155Right-handed alpha
Helix 91
91
F
157 159Right-handed 310
Helix 92
92
F
166 168Right-handed 310
Helix 93
93
F
179 188Right-handed alpha
Helix 94
94
F
195 201Right-handed alpha
Helix 95
95
F
203 215Right-handed alpha
Helix 96
96
F
227 229Right-handed 310
Helix 97
97
F
248 261Right-handed alpha
Helix 98
98
F
274 276Right-handed 310
Helix 99
99
F
281 293Right-handed alpha
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There are 6 sheets in PDB entry 5CEV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
4 8parallel
Strand 3
A
91 95parallel
Strand 4
A
264 270parallel
Strand 5
A
220 226parallel
Strand 6
A
116 121parallel
Strand 7
A
169 174parallel
Strand 8
A
191 194parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
4 8parallel
Strand 3
B
91 95parallel
Strand 4
B
264 270parallel
Strand 5
B
220 226parallel
Strand 6
B
116 121parallel
Strand 7
B
169 174parallel
Strand 8
B
191 194parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 45first strand
Strand 2
C
4 8parallel
Strand 3
C
91 95parallel
Strand 4
C
264 270parallel
Strand 5
C
220 226parallel
Strand 6
C
116 121parallel
Strand 7
C
169 174parallel
Strand 8
C
191 194parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
4 8parallel
Strand 3
D
91 95parallel
Strand 4
D
264 270parallel
Strand 5
D
220 226parallel
Strand 6
D
116 121parallel
Strand 7
D
169 174parallel
Strand 8
D
191 194parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
43 45first strand
Strand 2
E
4 8parallel
Strand 3
E
91 95parallel
Strand 4
E
264 270parallel
Strand 5
E
220 226parallel
Strand 6
E
116 121parallel
Strand 7
E
169 174parallel
Strand 8
E
191 194parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
43 45first strand
Strand 2
F
4 8parallel
Strand 3
F
91 95parallel
Strand 4
F
264 270parallel
Strand 5
F
220 226parallel
Strand 6
F
116 121parallel
Strand 7
F
169 174parallel
Strand 8
F
191 194parallel
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