Analysis of interatomic Contacts of Structural Units in PDB entry:
5COC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5COC entry

There is 1 chain in PDB entry 5COC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 217MET 1077
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5COC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
218 230Right-handed alpha
Helix 2
AA2
A
234 247Right-handed alpha
Helix 3
AA3
A
248 250Right-handed 310
Helix 4
AA4
A
251 264Right-handed alpha
Helix 5
AA5
A
1005 1021Right-handed alpha
Helix 6
AA6
A
1029 1039Right-handed alpha
Helix 7
AA7
A
1045 1055Right-handed alpha
Helix 8
AA8
A
1065 1076Right-handed alpha
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There are no sheets in PDB entry 5COC

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