Analysis of interatomic Contacts of Structural Units in PDB entry:
5DYE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DYE entry

There are 4 chains in PDB entry 5DYE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2GLU 244
B
 VAL 5GLU 247
C
 GLU 4PRO 245
D
 LYS 2GLU 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5DYE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 33Right-handed alpha
Helix 2
AA2
A
41 65Right-handed alpha
Helix 3
AA3
A
69 78Right-handed alpha
Helix 4
AA4
A
83 109Right-handed alpha
Helix 5
AA5
A
110 115Right-handed alpha
Helix 6
AA6
A
127 151Right-handed alpha
Helix 7
AA7
A
160 181Right-handed alpha
Helix 8
AA8
A
185 191Right-handed alpha
Helix 9
AA9
A
204 221Right-handed alpha
Helix 10
AB1
A
231 241Right-handed alpha
Helix 11
AB2
B
7 31Right-handed alpha
Helix 12
AB3
B
41 65Right-handed alpha
Helix 13
AB4
B
69 80Right-handed alpha
Helix 14
AB5
B
83 109Right-handed alpha
Helix 15
AB6
B
110 115Right-handed alpha
Helix 16
AB7
B
127 150Right-handed alpha
Helix 17
AB8
B
160 181Right-handed alpha
Helix 18
AB9
B
185 196Right-handed alpha
Helix 19
AC1
B
203 223Right-handed alpha
Helix 20
AC2
B
231 241Right-handed alpha
Helix 21
AC3
C
7 32Right-handed alpha
Helix 22
AC4
C
41 61Right-handed alpha
Helix 23
AC5
C
69 79Right-handed alpha
Helix 24
AC6
C
83 109Right-handed alpha
Helix 25
AC7
C
110 115Right-handed alpha
Helix 26
AC8
C
127 150Right-handed alpha
Helix 27
AC9
C
160 181Right-handed alpha
Helix 28
AD1
C
185 196Right-handed alpha
Helix 29
AD2
C
202 224Right-handed alpha
Helix 30
AD3
C
231 241Right-handed alpha
Helix 31
AD4
D
3 7Right-handed alpha
Helix 32
AD5
D
7 32Right-handed alpha
Helix 33
AD6
D
41 60Right-handed alpha
Helix 34
AD7
D
60 65Right-handed alpha
Helix 35
AD8
D
69 79Right-handed alpha
Helix 36
AD9
D
83 107Right-handed alpha
Helix 37
AE1
D
110 115Right-handed alpha
Helix 38
AE2
D
127 151Right-handed alpha
Helix 39
AE3
D
160 177Right-handed alpha
Helix 40
AE4
D
185 196Right-handed alpha
Helix 41
AE5
D
202 224Right-handed alpha
Helix 42
AE6
D
231 241Right-handed alpha
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There are no sheets in PDB entry 5DYE
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