Analysis of interatomic Contacts of Structural Units in PDB entry:
5EGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EGO entry

There are 6 chains in PDB entry 5EGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 278MET 334
D
G 20 A 32
D
G 34 G 37
E
C 1 T 3
E
G 5 C 18
B
ARG 217LYS 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5EGO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
280 294Right-handed alpha
Helix 2
AA2
A
301 313Right-handed alpha
Helix 3
AA3
A
315 330Right-handed alpha
Helix 4
AA4
B
224 236Right-handed alpha
Helix 5
AA5
B
242 254Right-handed alpha
Helix 6
AA6
B
256 273Right-handed alpha
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There are no sheets in PDB entry 5EGO

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il