Analysis of interatomic Contacts of Structural Units in PDB entry:
5EIG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5EIG entry

There are 16 chains in PDB entry 5EIG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 10	THR 211
A	TYR 213	PRO 399
B	GLY 10	THR 211
B	TYR 213	PRO 399
C	GLY 10	THR 211
C	TYR 213	PRO 399
D	GLY 10	THR 211
D	TYR 213	PRO 400
E	GLY 10	THR 211
E	TYR 213	PRO 400
F	GLY 10	THR 211
F	TYR 213	PRO 399
G	GLY 10	THR 211
G	TYR 213	PRO 399
H	GLY 10	THR 211
H	TYR 213	PRO 400

There are130 helices in PDB entry 5EIG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	25	Right-handed alpha
Helix 2	AA2	A	28	32	Right-handed 310
Helix 3	AA3	A	65	79	Right-handed alpha
Helix 4	AA4	A	89	99	Right-handed alpha
Helix 5	AA5	A	114	124	Right-handed alpha
Helix 6	AA6	A	125	128	Right-handed 310
Helix 7	AA7	A	139	147	Right-handed alpha
Helix 8	AA8	A	168	177	Right-handed alpha
Helix 9	AA9	A	178	180	Right-handed 310
Helix 10	AB1	A	197	202	Right-handed 310
Helix 11	AB2	A	229	244	Right-handed alpha
Helix 12	AB3	A	248	260	Right-handed alpha
Helix 13	AB4	A	261	282	Right-handed alpha
Helix 14	AB5	A	299	307	Right-handed alpha
Helix 15	AB6	A	321	332	Right-handed alpha
Helix 16	AB7	A	360	368	Right-handed alpha
Helix 17	AB8	A	382	398	Right-handed alpha
Helix 18	AB9	B	17	25	Right-handed alpha
Helix 19	AC1	B	28	32	Right-handed 310
Helix 20	AC2	B	65	80	Right-handed alpha
Helix 21	AC3	B	89	99	Right-handed alpha
Helix 22	AC4	B	114	124	Right-handed alpha
Helix 23	AC5	B	125	128	Right-handed 310
Helix 24	AC6	B	140	147	Right-handed alpha
Helix 25	AC7	B	168	177	Right-handed alpha
Helix 26	AC8	B	197	202	Right-handed 310
Helix 27	AC9	B	229	244	Right-handed alpha
Helix 28	AD1	B	248	260	Right-handed alpha
Helix 29	AD2	B	261	282	Right-handed alpha
Helix 30	AD3	B	299	307	Right-handed alpha
Helix 31	AD4	B	321	332	Right-handed alpha
Helix 32	AD5	B	362	368	Right-handed alpha
Helix 33	AD6	B	382	398	Right-handed alpha
Helix 34	AD7	C	17	25	Right-handed alpha
Helix 35	AD8	C	28	32	Right-handed 310
Helix 36	AD9	C	65	80	Right-handed alpha
Helix 37	AE1	C	89	99	Right-handed alpha
Helix 38	AE2	C	114	124	Right-handed alpha
Helix 39	AE3	C	125	128	Right-handed 310
Helix 40	AE4	C	139	147	Right-handed alpha
Helix 41	AE5	C	168	177	Right-handed alpha
Helix 42	AE6	C	197	202	Right-handed 310
Helix 43	AE7	C	229	244	Right-handed alpha
Helix 44	AE8	C	248	260	Right-handed alpha
Helix 45	AE9	C	261	282	Right-handed alpha
Helix 46	AF1	C	299	307	Right-handed alpha
Helix 47	AF2	C	321	331	Right-handed alpha
Helix 48	AF3	C	360	368	Right-handed alpha
Helix 49	AF4	C	382	398	Right-handed alpha
Helix 50	AF5	D	17	25	Right-handed alpha
Helix 51	AF6	D	28	32	Right-handed 310
Helix 52	AF7	D	65	80	Right-handed alpha
Helix 53	AF8	D	89	99	Right-handed alpha
Helix 54	AF9	D	114	124	Right-handed alpha
Helix 55	AG1	D	125	128	Right-handed 310
Helix 56	AG2	D	139	147	Right-handed alpha
Helix 57	AG3	D	168	177	Right-handed alpha
Helix 58	AG4	D	178	180	Right-handed 310
Helix 59	AG5	D	197	202	Right-handed 310
Helix 60	AG6	D	229	244	Right-handed alpha
Helix 61	AG7	D	248	260	Right-handed alpha
Helix 62	AG8	D	261	282	Right-handed alpha
Helix 63	AG9	D	299	307	Right-handed alpha
Helix 64	AH1	D	321	332	Right-handed alpha
Helix 65	AH2	D	360	368	Right-handed alpha
Helix 66	AH3	D	382	398	Right-handed alpha
Helix 67	AH4	E	17	25	Right-handed alpha
Helix 68	AH5	E	28	32	Right-handed 310
Helix 69	AH6	E	65	79	Right-handed alpha
Helix 70	AH7	E	89	99	Right-handed alpha
Helix 71	AH8	E	114	124	Right-handed alpha
Helix 72	AH9	E	125	128	Right-handed 310
Helix 73	AI1	E	139	147	Right-handed alpha
Helix 74	AI2	E	168	178	Right-handed alpha
Helix 75	AI3	E	197	202	Right-handed 310
Helix 76	AI4	E	229	244	Right-handed alpha
Helix 77	AI5	E	248	260	Right-handed alpha
Helix 78	AI6	E	261	282	Right-handed alpha
Helix 79	AI7	E	299	307	Right-handed alpha
Helix 80	AI8	E	321	332	Right-handed alpha
Helix 81	AI9	E	360	368	Right-handed alpha
Helix 82	AJ1	E	382	398	Right-handed alpha
Helix 83	AJ2	F	17	25	Right-handed alpha
Helix 84	AJ3	F	28	32	Right-handed 310
Helix 85	AJ4	F	65	80	Right-handed alpha
Helix 86	AJ5	F	89	99	Right-handed alpha
Helix 87	AJ6	F	114	124	Right-handed alpha
Helix 88	AJ7	F	125	128	Right-handed 310
Helix 89	AJ8	F	140	147	Right-handed alpha
Helix 90	AJ9	F	168	177	Right-handed alpha
Helix 91	AK1	F	197	202	Right-handed 310
Helix 92	AK2	F	229	244	Right-handed alpha
Helix 93	AK3	F	248	260	Right-handed alpha
Helix 94	AK4	F	261	282	Right-handed alpha
Helix 95	AK5	F	299	307	Right-handed alpha
Helix 96	AK6	F	321	332	Right-handed alpha
Helix 97	AK7	F	362	368	Right-handed alpha
Helix 98	AK8	F	382	398	Right-handed alpha
Helix 99	AK9	G	17	25	Right-handed alpha
Helix 100	AL1	G	28	32	Right-handed 310
Helix 101	AL2	G	65	80	Right-handed alpha
Helix 102	AL3	G	89	99	Right-handed alpha
Helix 103	AL4	G	114	124	Right-handed alpha
Helix 104	AL5	G	125	128	Right-handed 310
Helix 105	AL6	G	139	147	Right-handed alpha
Helix 106	AL7	G	168	177	Right-handed alpha
Helix 107	AL8	G	197	202	Right-handed 310
Helix 108	AL9	G	229	244	Right-handed alpha
Helix 109	AM1	G	248	260	Right-handed alpha
Helix 110	AM2	G	261	282	Right-handed alpha
Helix 111	AM3	G	299	307	Right-handed alpha
Helix 112	AM4	G	321	332	Right-handed alpha
Helix 113	AM5	G	360	368	Right-handed alpha
Helix 114	AM6	G	382	398	Right-handed alpha
Helix 115	AM7	H	17	25	Right-handed alpha
Helix 116	AM8	H	28	32	Right-handed 310
Helix 117	AM9	H	65	80	Right-handed alpha
Helix 118	AN1	H	89	99	Right-handed alpha
Helix 119	AN2	H	114	124	Right-handed alpha
Helix 120	AN3	H	125	128	Right-handed 310
Helix 121	AN4	H	139	147	Right-handed alpha
Helix 122	AN5	H	168	177	Right-handed alpha
Helix 123	AN6	H	197	202	Right-handed 310
Helix 124	AN7	H	229	244	Right-handed alpha
Helix 125	AN8	H	248	260	Right-handed alpha
Helix 126	AN9	H	261	282	Right-handed alpha
Helix 127	AO1	H	299	307	Right-handed alpha
Helix 128	AO2	H	321	331	Right-handed alpha
Helix 129	AO3	H	362	368	Right-handed alpha
Helix 130	AO4	H	382	398	Right-handed alpha

There are 16 sheets in PDB entry 5EIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	87	first strand
Strand 2	A	223	227	anti-parallel
Strand 3	A	205	209	anti-parallel
Strand 4	A	183	187	parallel
Strand 5	A	151	157	parallel
Strand 6	A	106	110	parallel
Strand 7	A	131	135	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	290	first strand
Strand 2	A	313	318	anti-parallel
Strand 3	A	373	377	anti-parallel
Strand 4	A	347	349	anti-parallel
Strand 5	A	336	337	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	87	first strand
Strand 2	B	223	227	anti-parallel
Strand 3	B	205	209	anti-parallel
Strand 4	B	183	187	parallel
Strand 5	B	151	157	parallel
Strand 6	B	106	110	parallel
Strand 7	B	131	135	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	290	first strand
Strand 2	B	313	318	anti-parallel
Strand 3	B	373	377	anti-parallel
Strand 4	B	347	349	anti-parallel
Strand 5	B	336	337	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	87	first strand
Strand 2	C	223	227	anti-parallel
Strand 3	C	205	209	anti-parallel
Strand 4	C	183	187	parallel
Strand 5	C	151	157	parallel
Strand 6	C	106	110	parallel
Strand 7	C	131	135	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	290	first strand
Strand 2	C	313	318	anti-parallel
Strand 3	C	373	377	anti-parallel
Strand 4	C	347	349	anti-parallel
Strand 5	C	336	337	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	87	first strand
Strand 2	D	223	227	anti-parallel
Strand 3	D	205	209	anti-parallel
Strand 4	D	183	187	parallel
Strand 5	D	151	157	parallel
Strand 6	D	106	110	parallel
Strand 7	D	131	135	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	290	first strand
Strand 2	D	313	318	anti-parallel
Strand 3	D	373	377	anti-parallel
Strand 4	D	347	349	anti-parallel
Strand 5	D	336	337	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	87	first strand
Strand 2	E	223	227	anti-parallel
Strand 3	E	205	209	anti-parallel
Strand 4	E	183	187	parallel
Strand 5	E	151	157	parallel
Strand 6	E	106	110	parallel
Strand 7	E	131	135	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	290	first strand
Strand 2	E	313	318	anti-parallel
Strand 3	E	373	377	anti-parallel
Strand 4	E	347	349	anti-parallel
Strand 5	E	336	337	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	87	first strand
Strand 2	F	223	227	anti-parallel
Strand 3	F	205	209	anti-parallel
Strand 4	F	183	187	parallel
Strand 5	F	151	157	parallel
Strand 6	F	106	110	parallel
Strand 7	F	131	135	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	286	290	first strand
Strand 2	F	313	318	anti-parallel
Strand 3	F	373	377	anti-parallel
Strand 4	F	347	349	anti-parallel
Strand 5	F	336	337	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	87	first strand
Strand 2	G	223	227	anti-parallel
Strand 3	G	205	209	anti-parallel
Strand 4	G	183	187	parallel
Strand 5	G	151	157	parallel
Strand 6	G	106	110	parallel
Strand 7	G	131	135	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	286	290	first strand
Strand 2	G	313	318	anti-parallel
Strand 3	G	373	377	anti-parallel
Strand 4	G	347	349	anti-parallel
Strand 5	G	336	337	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	83	87	first strand
Strand 2	H	223	227	anti-parallel
Strand 3	H	205	209	anti-parallel
Strand 4	H	183	187	parallel
Strand 5	H	151	157	parallel
Strand 6	H	106	110	parallel
Strand 7	H	131	135	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	286	290	first strand
Strand 2	H	313	318	anti-parallel
Strand 3	H	373	377	anti-parallel
Strand 4	H	347	349	anti-parallel
Strand 5	H	336	337	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5EIG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5EIG