Analysis of interatomic Contacts of Structural Units in PDB entry:
5ETE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ETE entry

There is 1 chain in PDB entry 5ETE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 158ALA 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5ETE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
160 175Right-handed alpha
Helix 2
AA2
A
186 199Right-handed alpha
Helix 3
AA3
A
222 233Right-handed alpha
Helix 4
AA4
A
234 237Right-handed 310
Helix 5
AA5
A
248 256Right-handed alpha
Helix 6
AA6
A
290 295Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5ETE.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
184 185first strand
Strand 2
A
261 268parallel
Strand 3
A
275 282anti-parallel
Strand 4
A
214 219anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il