Analysis of interatomic Contacts of Structural Units in PDB entry:
5EWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EWL entry

There are 4 chains in PDB entry 5EWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 23THR 407
B
PRO 32PRO 392
C
ASP 23THR 407
D
PRO 32THR 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5EWL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 53Right-handed alpha
Helix 2
AA2
A
70 82Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
104 114Right-handed alpha
Helix 5
AA5
A
125 130Right-handed 310
Helix 6
AA6
A
143 146Right-handed 310
Helix 7
AA7
A
147 159Right-handed alpha
Helix 8
AA8
A
170 185Right-handed alpha
Helix 9
AA9
A
225 234Right-handed alpha
Helix 10
AB1
A
245 259Right-handed alpha
Helix 11
AB2
A
272 276Right-handed 310
Helix 12
AB3
A
277 283Right-handed alpha
Helix 13
AB4
A
297 317Right-handed alpha
Helix 14
AB5
A
338 348Right-handed alpha
Helix 15
AB6
B
46 51Right-handed alpha
Helix 16
AB7
B
77 93Right-handed alpha
Helix 17
AB8
B
106 120Right-handed alpha
Helix 18
AB9
B
128 132Right-handed 310
Helix 19
AC1
B
149 165Right-handed alpha
Helix 20
AC2
B
178 191Right-handed alpha
Helix 21
AC3
B
214 221Right-handed alpha
Helix 22
AC4
B
233 247Right-handed alpha
Helix 23
AC5
B
259 264Right-handed alpha
Helix 24
AC6
B
288 312Right-handed alpha
Helix 25
AC7
B
327 331Right-handed 310
Helix 26
AC8
B
335 340Right-handed alpha
Helix 27
AC9
C
35 53Right-handed alpha
Helix 28
AD1
C
70 82Right-handed alpha
Helix 29
AD2
C
83 85Right-handed 310
Helix 30
AD3
C
104 114Right-handed alpha
Helix 31
AD4
C
125 130Right-handed 310
Helix 32
AD5
C
143 146Right-handed 310
Helix 33
AD6
C
147 159Right-handed alpha
Helix 34
AD7
C
170 185Right-handed alpha
Helix 35
AD8
C
225 234Right-handed alpha
Helix 36
AD9
C
245 259Right-handed alpha
Helix 37
AE1
C
272 276Right-handed 310
Helix 38
AE2
C
277 283Right-handed alpha
Helix 39
AE3
C
297 317Right-handed alpha
Helix 40
AE4
C
338 348Right-handed alpha
Helix 41
AE5
D
46 51Right-handed alpha
Helix 42
AE6
D
77 92Right-handed alpha
Helix 43
AE7
D
106 120Right-handed alpha
Helix 44
AE8
D
128 132Right-handed 310
Helix 45
AE9
D
149 165Right-handed alpha
Helix 46
AF1
D
178 192Right-handed alpha
Helix 47
AF2
D
214 221Right-handed alpha
Helix 48
AF3
D
233 247Right-handed alpha
Helix 49
AF4
D
259 264Right-handed alpha
Helix 50
AF5
D
288 312Right-handed alpha
Helix 51
AF6
D
323 331Right-handed 310
Helix 52
AF7
D
335 340Right-handed alpha
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There are 13 sheets in PDB entry 5EWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 66first strand
Strand 2
A
25 33parallel
Strand 3
A
87 92parallel
Strand 4
A
118 120parallel
Strand 5
A
137 139parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
211 218first strand
Strand 2
A
162 168parallel
Strand 3
A
239 243parallel
Strand 4
A
267 270parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
288 292first strand
Strand 2
A
372 378anti-parallel
Strand 3
A
381 388anti-parallel
Strand 4
A
393 395anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
351 354first strand
Strand 2
A
357 361anti-parallel
Strand 3
A
367 368anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
65 73first strand
Strand 2
B
34 42parallel
Strand 3
B
96 100parallel
Strand 4
B
123 127parallel
Strand 5
B
143 145parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
198 204first strand
Strand 2
B
168 173parallel
Strand 3
B
227 231parallel
Strand 4
B
255 258parallel
Strand 5
B
278 282parallel
Strand 6
B
362 367anti-parallel
Strand 7
B
373 379anti-parallel
Strand 8
B
384 386anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
343 344first strand
Strand 2
B
347 348anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
58 66first strand
Strand 2
C
25 33parallel
Strand 3
C
87 92parallel
Strand 4
C
118 120parallel
Strand 5
C
137 139parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
211 218first strand
Strand 2
C
162 168parallel
Strand 3
C
239 243parallel
Strand 4
C
267 270parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
288 292first strand
Strand 2
C
372 378anti-parallel
Strand 3
C
381 388anti-parallel
Strand 4
C
393 395anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
351 354first strand
Strand 2
C
357 361anti-parallel
Strand 3
C
367 368anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
65 73first strand
Strand 2
D
34 42parallel
Strand 3
D
96 100parallel
Strand 4
D
123 127parallel
Strand 5
D
143 145parallel
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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
198 204first strand
Strand 2
D
168 173parallel
Strand 3
D
227 231parallel
Strand 4
D
255 258parallel
Strand 5
D
278 282parallel
Strand 6
D
362 367anti-parallel
Strand 7
D
373 379anti-parallel
Strand 8
D
384 386anti-parallel
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