Analysis of interatomic Contacts of Structural Units in PDB entry:
5FN3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FN3 entry

There are 5 chains in PDB entry 5FN3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 34PHE 698
B
 GLY 78ILE 467
C
 GLY 2LEU 244
D
 ASN 2PRO 101
G
 ALA 5ALA 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 5FN3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 41Right-handed alpha
Helix 2
2
A
78 87Right-handed alpha
Helix 3
3
A
101 103Right-handed 310
Helix 4
4
A
104 114Right-handed alpha
Helix 5
5
A
142 146Right-handed 310
Helix 6
6
A
185 200Right-handed alpha
Helix 7
7
A
202 206Right-handed 310
Helix 8
8
A
226 240Right-handed alpha
Helix 9
9
A
298 315Right-handed alpha
Helix 10
10
A
339 350Right-handed alpha
Helix 11
11
A
381 387Right-handed alpha
Helix 12
12
A
387 407Right-handed alpha
Helix 13
13
A
426 431Right-handed alpha
Helix 14
14
A
459 464Right-handed alpha
Helix 15
15
A
474 479Right-handed alpha
Helix 16
16
A
481 502Right-handed alpha
Helix 17
17
A
514 527Right-handed alpha
Helix 18
18
A
531 537Right-handed alpha
Helix 19
19
A
539 546Right-handed 310
Helix 20
20
A
561 576Right-handed alpha
Helix 21
21
A
582 588Right-handed alpha
Helix 22
22
A
633 638Right-handed alpha
Helix 23
23
A
665 693Right-handed alpha
Helix 24
24
B
79 103Right-handed alpha
Helix 25
25
B
126 156Right-handed alpha
Helix 26
26
B
159 190Right-handed alpha
Helix 27
27
B
195 215Right-handed alpha
Helix 28
28
B
218 241Right-handed alpha
Helix 29
29
B
242 262Right-handed alpha
Helix 30
30
B
382 399Right-handed alpha
Helix 31
31
B
403 429Right-handed alpha
Helix 32
32
B
434 452Right-handed alpha
Helix 33
33
B
452 464Right-handed alpha
Helix 34
34
C
2 24Right-handed alpha
Helix 35
35
C
28 61Right-handed alpha
Helix 36
36
C
64 106Right-handed alpha
Helix 37
37
C
113 141Right-handed alpha
Helix 38
38
C
155 185Right-handed alpha
Helix 39
39
C
186 206Right-handed alpha
Helix 40
40
C
213 233Right-handed alpha
Helix 41
41
C
235 243Right-handed alpha
Helix 42
42
D
7 23Right-handed alpha
Helix 43
43
D
26 37Right-handed alpha
Helix 44
44
D
38 44Right-handed alpha
Helix 45
45
D
49 82Right-handed alpha
Helix 46
46
D
85 92Right-handed alpha
Helix 47
47
G
5 13Right-handed alpha
Helix 48
48
G
16 24Right-handed alpha
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There are 5 sheets in PDB entry 5FN3. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
657 663anti-parallel
Strand 3
A
212 218anti-parallel
Strand 4
A
69 75anti-parallel
Strand 5
A
94 99parallel
Strand 6
A
121 124parallel
Strand 7
A
180 183parallel
Strand 8
A
48 49anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
649 650anti-parallel
Strand 3
A
249 250anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 414first strand
Strand 2
A
375 379parallel
Strand 3
A
437 442anti-parallel
Strand 4
A
361 365parallel
Strand 5
A
275 280parallel
Strand 6
A
324 329parallel
Strand 7
A
254 257anti-parallel
Strand 8
A
627 629anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
602 605first strand
Strand 2
A
619 622anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
D
93 95anti-parallel
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