Analysis of interatomic Contacts of Structural Units in PDB entry:
5FW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FW1 entry

There are 2 chains in PDB entry 5FW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 A 1 G 81
B
 LYS 4GLY 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 5FW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
59 94Right-handed alpha
Helix 2
2
B
96 103Right-handed alpha
Helix 3
3
B
107 111Right-handed 310
Helix 4
4
B
121 132Right-handed alpha
Helix 5
5
B
134 145Right-handed alpha
Helix 6
6
B
150 164Right-handed alpha
Helix 7
7
B
181 196Right-handed alpha
Helix 8
8
B
207 213Right-handed alpha
Helix 9
9
B
217 228Right-handed alpha
Helix 10
10
B
236 246Right-handed alpha
Helix 11
11
B
252 257Right-handed alpha
Helix 12
12
B
270 283Right-handed alpha
Helix 13
13
B
286 307Right-handed alpha
Helix 14
14
B
315 343Right-handed alpha
Helix 15
15
B
346 352Right-handed alpha
Helix 16
16
B
358 364Right-handed alpha
Helix 17
17
B
368 382Right-handed alpha
Helix 18
18
B
386 395Right-handed alpha
Helix 19
19
B
404 410Right-handed 310
Helix 20
20
B
411 428Right-handed alpha
Helix 21
21
B
430 446Right-handed alpha
Helix 22
22
B
477 482Right-handed alpha
Helix 23
23
B
483 494Right-handed alpha
Helix 24
24
B
512 525Right-handed alpha
Helix 25
25
B
541 552Right-handed alpha
Helix 26
26
B
560 568Right-handed alpha
Helix 27
27
B
591 602Right-handed alpha
Helix 28
28
B
603 609Right-handed alpha
Helix 29
29
B
612 626Right-handed alpha
Helix 30
30
B
628 637Right-handed alpha
Helix 31
31
B
638 643Right-handed 310
Helix 32
32
B
644 654Right-handed alpha
Helix 33
33
B
663 669Right-handed alpha
Helix 34
34
B
678 685Right-handed alpha
Helix 35
35
B
692 699Right-handed alpha
Helix 36
36
B
703 710Right-handed alpha
Helix 37
37
B
719 727Right-handed alpha
Helix 38
38
B
730 751Right-handed alpha
Helix 39
39
B
776 792Right-handed alpha
Helix 40
40
B
794 799Right-handed alpha
Helix 41
41
B
802 807Right-handed 310
Helix 42
42
B
808 817Right-handed alpha
Helix 43
43
B
829 836Right-handed 310
Helix 44
44
B
860 865Right-handed 310
Helix 45
45
B
872 889Right-handed alpha
Helix 46
46
B
893 901Right-handed alpha
Helix 47
47
B
902 906Right-handed 310
Helix 48
48
B
909 922Right-handed alpha
Helix 49
49
B
925 940Right-handed alpha
Helix 50
50
B
959 971Right-handed alpha
Helix 51
51
B
980 1001Right-handed alpha
Helix 52
52
B
1004 1009Right-handed alpha
Helix 53
53
B
1030 1042Right-handed alpha
Helix 54
54
B
1043 1047Right-handed 310
Helix 55
55
B
1078 1089Right-handed alpha
Helix 56
56
B
1127 1132Right-handed alpha
Helix 57
57
B
1170 1177Right-handed alpha
Helix 58
58
B
1177 1185Right-handed alpha
Helix 59
59
B
1191 1195Right-handed 310
Helix 60
60
B
1207 1209Right-handed 310
Helix 61
61
B
1229 1241Right-handed alpha
Helix 62
62
B
1253 1262Right-handed alpha
Helix 63
63
B
1264 1280Right-handed alpha
Helix 64
64
B
1283 1297Right-handed alpha
Helix 65
65
B
1298 1300Right-handed 310
Helix 66
66
B
1301 1317Right-handed alpha
Helix 67
67
B
1339 1344Right-handed 310
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There are 9 sheets in PDB entry 5FW1. Click on sheet of interest to get list of strands forming it: BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
954 957first strand
Strand 2
B
758 763parallel
Strand 3
B
6 11parallel
Strand 4
B
15 21anti-parallel
Strand 5
B
48 52anti-parallel
Strand 6
B
1093 1096parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 46first strand
Strand 2
B
29 36anti-parallel
Strand 3
B
1357 1361parallel
Strand 4
B
1346 1350anti-parallel
Strand 5
B
1203 1205anti-parallel
Strand 6
B
1211 1214anti-parallel
Strand 7
B
1220 1222anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 539first strand
Strand 2
B
528 530anti-parallel
Strand 3
B
579 580anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
837 840first strand
Strand 2
B
855 858anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1063 1065first strand
Strand 2
B
1072 1075anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1156 1167first strand
Strand 2
B
1139 1151anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1187 1188first strand
Strand 2
B
1139 1151anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1196 1198first strand
Strand 2
B
1139 1151anti-parallel
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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1324 1325first strand
Strand 2
B
1330 1331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il