Analysis of interatomic Contacts of Structural Units in PDB entry:
5FZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FZO entry

There are 4 chains in PDB entry 5FZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0LEU 2316
A
 SER 2318ARG 2498
B
 MET 0LEU 2316
B
 SER 2318ARG 2498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5FZO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2177 2187Right-handed alpha
Helix 2
2
A
2196 2200Right-handed 310
Helix 3
3
A
2202 2206Right-handed 310
Helix 4
4
A
2207 2216Right-handed alpha
Helix 5
5
A
2234 2244Right-handed alpha
Helix 6
6
A
2245 2248Right-handed 310
Helix 7
7
A
2267 2274Right-handed alpha
Helix 8
8
A
2274 2285Right-handed alpha
Helix 9
9
A
2287 2292Right-handed alpha
Helix 10
10
A
2304 2308Right-handed 310
Helix 11
11
A
2359 2369Right-handed alpha
Helix 12
12
A
2373 2382Right-handed alpha
Helix 13
13
A
2395 2397Right-handed 310
Helix 14
14
A
2398 2413Right-handed alpha
Helix 15
15
A
2422 2427Right-handed alpha
Helix 16
16
A
2432 2444Right-handed alpha
Helix 17
17
A
2486 2497Right-handed alpha
Helix 18
18
B
2177 2187Right-handed alpha
Helix 19
19
B
2196 2201Right-handed alpha
Helix 20
20
B
2202 2206Right-handed 310
Helix 21
21
B
2207 2216Right-handed alpha
Helix 22
22
B
2234 2241Right-handed alpha
Helix 23
23
B
2245 2248Right-handed 310
Helix 24
24
B
2267 2274Right-handed alpha
Helix 25
25
B
2274 2285Right-handed alpha
Helix 26
26
B
2287 2292Right-handed alpha
Helix 27
27
B
2304 2308Right-handed 310
Helix 28
28
B
2359 2369Right-handed alpha
Helix 29
29
B
2373 2382Right-handed alpha
Helix 30
30
B
2395 2397Right-handed 310
Helix 31
31
B
2398 2413Right-handed alpha
Helix 32
32
B
2422 2427Right-handed alpha
Helix 33
33
B
2432 2444Right-handed alpha
Helix 34
34
B
2483 2485Right-handed 310
Helix 35
35
B
2486 2497Right-handed alpha
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There are 4 sheets in PDB entry 5FZO. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2159 2162first strand
Strand 2
A
2167 2170anti-parallel
Strand 3
A
2192 2194parallel
Strand 4
A
2457 2460anti-parallel
Strand 5
A
2341 2350anti-parallel
Strand 6
A
2473 2481anti-parallel
Strand 7
A
2315 2319anti-parallel
Strand 8
A
2259 2261anti-parallel
Strand 9
A
2223 2224anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2333 2337first strand
Strand 2
A
2465 2470anti-parallel
Strand 3
A
2387 2394anti-parallel
Strand 4
A
2448 2453anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2159 2162first strand
Strand 2
B
2167 2170anti-parallel
Strand 3
B
2192 2194parallel
Strand 4
B
2457 2460anti-parallel
Strand 5
B
2341 2350anti-parallel
Strand 6
B
2473 2481anti-parallel
Strand 7
B
2315 2319anti-parallel
Strand 8
B
2259 2261anti-parallel
Strand 9
B
2223 2224anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2333 2337first strand
Strand 2
B
2465 2470anti-parallel
Strand 3
B
2387 2394anti-parallel
Strand 4
B
2448 2453anti-parallel
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