Analysis of interatomic Contacts of Structural Units in PDB entry:
5HC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HC2 entry

There are 4 chains in PDB entry 5HC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 344
B
 ASN 3GLY 344
C
 THR 2GLY 344
D
 THR 2GLY 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 5HC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 17Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
42 59Right-handed alpha
Helix 4
AA4
A
117 129Right-handed alpha
Helix 5
AA5
A
155 171Right-handed alpha
Helix 6
AA6
A
171 176Right-handed alpha
Helix 7
AA7
A
188 204Right-handed alpha
Helix 8
AA8
A
206 210Right-handed 310
Helix 9
AA9
A
230 235Right-handed alpha
Helix 10
AB1
A
245 258Right-handed alpha
Helix 11
AB2
A
264 268Right-handed 310
Helix 12
AB3
A
269 274Right-handed alpha
Helix 13
AB4
A
289 304Right-handed alpha
Helix 14
AB5
A
318 322Right-handed 310
Helix 15
AB6
A
326 343Right-handed alpha
Helix 16
AB7
B
4 8Right-handed alpha
Helix 17
AB8
B
12 20Right-handed alpha
Helix 18
AB9
B
32 41Right-handed alpha
Helix 19
AC1
B
42 58Right-handed alpha
Helix 20
AC2
B
117 129Right-handed alpha
Helix 21
AC3
B
155 171Right-handed alpha
Helix 22
AC4
B
171 176Right-handed alpha
Helix 23
AC5
B
188 204Right-handed alpha
Helix 24
AC6
B
206 210Right-handed 310
Helix 25
AC7
B
230 235Right-handed alpha
Helix 26
AC8
B
245 258Right-handed alpha
Helix 27
AC9
B
264 268Right-handed 310
Helix 28
AD1
B
269 274Right-handed alpha
Helix 29
AD2
B
289 303Right-handed alpha
Helix 30
AD3
B
318 322Right-handed 310
Helix 31
AD4
B
326 343Right-handed alpha
Helix 32
AD5
C
3 8Right-handed alpha
Helix 33
AD6
C
12 20Right-handed alpha
Helix 34
AD7
C
32 41Right-handed alpha
Helix 35
AD8
C
42 58Right-handed alpha
Helix 36
AD9
C
117 129Right-handed alpha
Helix 37
AE1
C
155 171Right-handed alpha
Helix 38
AE2
C
171 176Right-handed alpha
Helix 39
AE3
C
188 204Right-handed alpha
Helix 40
AE4
C
206 210Right-handed 310
Helix 41
AE5
C
229 235Right-handed alpha
Helix 42
AE6
C
245 258Right-handed alpha
Helix 43
AE7
C
264 268Right-handed 310
Helix 44
AE8
C
269 274Right-handed alpha
Helix 45
AE9
C
289 303Right-handed alpha
Helix 46
AF1
C
318 322Right-handed 310
Helix 47
AF2
C
326 343Right-handed alpha
Helix 48
AF3
D
3 8Right-handed alpha
Helix 49
AF4
D
12 20Right-handed alpha
Helix 50
AF5
D
32 41Right-handed alpha
Helix 51
AF6
D
42 59Right-handed alpha
Helix 52
AF7
D
117 129Right-handed alpha
Helix 53
AF8
D
155 171Right-handed alpha
Helix 54
AF9
D
171 176Right-handed alpha
Helix 55
AG1
D
188 204Right-handed alpha
Helix 56
AG2
D
206 210Right-handed 310
Helix 57
AG3
D
230 235Right-handed alpha
Helix 58
AG4
D
245 258Right-handed alpha
Helix 59
AG5
D
264 268Right-handed 310
Helix 60
AG6
D
269 274Right-handed alpha
Helix 61
AG7
D
289 304Right-handed alpha
Helix 62
AG8
D
318 322Right-handed 310
Helix 63
AG9
D
326 343Right-handed alpha
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There are 3 sheets in PDB entry 5HC2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 78first strand
Strand 2
A
85 93anti-parallel
Strand 3
A
133 138anti-parallel
Strand 4
A
99 105parallel
Strand 5
A
177 187parallel
Strand 6
A
212 216parallel
Strand 7
A
279 284parallel
Strand 8
A
307 312parallel
Strand 9
B
307 312anti-parallel
Strand 10
B
279 284parallel
Strand 11
B
212 216parallel
Strand 12
B
177 187parallel
Strand 13
B
99 105parallel
Strand 14
B
133 138parallel
Strand 15
B
85 93anti-parallel
Strand 16
B
70 78anti-parallel
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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 78first strand
Strand 2
C
85 93anti-parallel
Strand 3
C
133 138anti-parallel
Strand 4
C
99 105parallel
Strand 5
C
177 187parallel
Strand 6
C
212 216parallel
Strand 7
C
279 284parallel
Strand 8
C
307 312parallel
Strand 9
D
307 312anti-parallel
Strand 10
D
279 284parallel
Strand 11
D
212 216parallel
Strand 12
D
177 187parallel
Strand 13
D
99 105parallel
Strand 14
D
133 138parallel
Strand 15
D
85 93anti-parallel
Strand 16
D
70 78anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 24first strand
Strand 2
D
239 240parallel
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