Analysis of interatomic Contacts of Structural Units in PDB entry:
5HNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HNH entry

There are 5 chains in PDB entry 5HNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2VAL 280
L
 G 101 G 101
L
 A 103 A 111
M
 T 201 T 209
M
 C 212 C 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5HNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 37Right-handed alpha
Helix 2
AA2
A
41 57Right-handed alpha
Helix 3
AA3
A
61 72Right-handed alpha
Helix 4
AA4
A
90 100Right-handed alpha
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
121 131Right-handed alpha
Helix 7
AA7
A
136 151Right-handed alpha
Helix 8
AA8
A
157 164Right-handed alpha
Helix 9
AA9
A
167 172Right-handed alpha
Helix 10
AB1
A
176 190Right-handed alpha
Helix 11
AB2
A
202 220Right-handed alpha
Helix 12
AB3
A
236 245Right-handed alpha
Helix 13
AB4
A
254 258Right-handed 310
Helix 14
AB5
A
262 279Right-handed alpha
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There are 2 sheets in PDB entry 5HNH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
86 89anti-parallel
Strand 3
A
80 83anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
229 232anti-parallel
Strand 3
A
223 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il