Analysis of interatomic Contacts of Structural Units in PDB entry:
5I94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I94 entry

There are 4 chains in PDB entry 5I94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 136GLY 545
B
PRO 136GLY 545
C
PRO 136GLY 545
D
PRO 136GLY 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 5I94. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
137 148Right-handed alpha
Helix 2
AA2
A
155 164Right-handed alpha
Helix 3
AA3
A
171 173Right-handed 310
Helix 4
AA4
A
174 185Right-handed alpha
Helix 5
AA5
A
195 204Right-handed alpha
Helix 6
AA6
A
206 215Right-handed alpha
Helix 7
AA7
A
222 239Right-handed alpha
Helix 8
AA8
A
249 254Right-handed alpha
Helix 9
AA9
A
286 300Right-handed alpha
Helix 10
AB1
A
300 308Right-handed alpha
Helix 11
AB2
A
333 342Right-handed alpha
Helix 12
AB3
A
349 365Right-handed alpha
Helix 13
AB4
A
373 383Right-handed alpha
Helix 14
AB5
A
384 397Right-handed alpha
Helix 15
AB6
A
405 418Right-handed alpha
Helix 16
AB7
A
422 435Right-handed alpha
Helix 17
AB8
A
448 463Right-handed alpha
Helix 18
AB9
A
464 466Right-handed 310
Helix 19
AC1
A
467 475Right-handed alpha
Helix 20
AC2
A
510 524Right-handed alpha
Helix 21
AC3
B
137 148Right-handed alpha
Helix 22
AC4
B
155 165Right-handed alpha
Helix 23
AC5
B
171 173Right-handed 310
Helix 24
AC6
B
174 188Right-handed alpha
Helix 25
AC7
B
195 204Right-handed alpha
Helix 26
AC8
B
206 215Right-handed alpha
Helix 27
AC9
B
222 239Right-handed alpha
Helix 28
AD1
B
284 286Right-handed 310
Helix 29
AD2
B
287 300Right-handed alpha
Helix 30
AD3
B
300 308Right-handed alpha
Helix 31
AD4
B
333 342Right-handed alpha
Helix 32
AD5
B
351 365Right-handed alpha
Helix 33
AD6
B
373 382Right-handed alpha
Helix 34
AD7
B
384 397Right-handed alpha
Helix 35
AD8
B
405 418Right-handed alpha
Helix 36
AD9
B
423 435Right-handed alpha
Helix 37
AE1
B
448 463Right-handed alpha
Helix 38
AE2
B
464 466Right-handed 310
Helix 39
AE3
B
467 475Right-handed alpha
Helix 40
AE4
B
510 524Right-handed alpha
Helix 41
AE5
C
138 148Right-handed alpha
Helix 42
AE6
C
154 164Right-handed alpha
Helix 43
AE7
C
171 173Right-handed 310
Helix 44
AE8
C
174 188Right-handed alpha
Helix 45
AE9
C
195 203Right-handed alpha
Helix 46
AF1
C
206 215Right-handed alpha
Helix 47
AF2
C
222 238Right-handed alpha
Helix 48
AF3
C
249 254Right-handed alpha
Helix 49
AF4
C
284 286Right-handed 310
Helix 50
AF5
C
287 300Right-handed alpha
Helix 51
AF6
C
300 308Right-handed alpha
Helix 52
AF7
C
333 342Right-handed alpha
Helix 53
AF8
C
349 365Right-handed alpha
Helix 54
AF9
C
373 383Right-handed alpha
Helix 55
AG1
C
384 397Right-handed alpha
Helix 56
AG2
C
405 418Right-handed alpha
Helix 57
AG3
C
422 435Right-handed alpha
Helix 58
AG4
C
448 463Right-handed alpha
Helix 59
AG5
C
464 466Right-handed 310
Helix 60
AG6
C
467 475Right-handed alpha
Helix 61
AG7
C
510 524Right-handed alpha
Helix 62
AG8
D
137 148Right-handed alpha
Helix 63
AG9
D
155 164Right-handed alpha
Helix 64
AH1
D
171 173Right-handed 310
Helix 65
AH2
D
174 187Right-handed alpha
Helix 66
AH3
D
195 204Right-handed alpha
Helix 67
AH4
D
206 215Right-handed alpha
Helix 68
AH5
D
222 238Right-handed alpha
Helix 69
AH6
D
249 254Right-handed alpha
Helix 70
AH7
D
284 286Right-handed 310
Helix 71
AH8
D
287 308Right-handed alpha
Helix 72
AH9
D
333 342Right-handed alpha
Helix 73
AI1
D
349 365Right-handed alpha
Helix 74
AI2
D
373 382Right-handed alpha
Helix 75
AI3
D
384 397Right-handed alpha
Helix 76
AI4
D
405 417Right-handed alpha
Helix 77
AI5
D
422 435Right-handed alpha
Helix 78
AI6
D
448 463Right-handed alpha
Helix 79
AI7
D
464 466Right-handed 310
Helix 80
AI8
D
467 475Right-handed alpha
Helix 81
AI9
D
510 524Right-handed alpha
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There are 15 sheets in PDB entry 5I94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
153 154first strand
Strand 2
A
193 194anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
244 245first strand
Strand 2
A
503 504anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
271 275first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
495 500anti-parallel
Strand 4
A
486 491anti-parallel
Strand 5
A
479 481anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
281 282first strand
Strand 2
A
419 421anti-parallel
Strand 3
A
371 372anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
153 154first strand
Strand 2
B
193 194anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
244 245first strand
Strand 2
B
503 504anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
271 275first strand
Strand 2
B
261 266anti-parallel
Strand 3
B
495 500anti-parallel
Strand 4
B
486 491anti-parallel
Strand 5
B
479 481anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
280 282first strand
Strand 2
B
419 422anti-parallel
Strand 3
B
370 372anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
244 245first strand
Strand 2
C
503 504anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
271 275first strand
Strand 2
C
261 266anti-parallel
Strand 3
C
495 500anti-parallel
Strand 4
C
486 491anti-parallel
Strand 5
C
479 481anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
281 282first strand
Strand 2
C
419 421anti-parallel
Strand 3
C
370 372anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
153 154first strand
Strand 2
D
193 194anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
244 245first strand
Strand 2
D
503 504anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
271 275first strand
Strand 2
D
261 266anti-parallel
Strand 3
D
495 500anti-parallel
Strand 4
D
486 491anti-parallel
Strand 5
D
479 481anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
281 282first strand
Strand 2
D
419 421anti-parallel
Strand 3
D
370 372anti-parallel
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