Analysis of interatomic Contacts of Structural Units in PDB entry:
5ICS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ICS entry

There are 3 chains in PDB entry 5ICS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PRO 262
C
 GLY 4GLY 271
D
 GLY 4VAL 161
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 5ICS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
65 81Right-handed alpha
Helix 4
AA4
A
98 102Right-handed 310
Helix 5
AA5
A
103 115Right-handed alpha
Helix 6
AA6
A
115 133Right-handed alpha
Helix 7
AA7
A
141 147Right-handed alpha
Helix 8
AA8
A
151 173Right-handed alpha
Helix 9
AA9
A
174 176Right-handed 310
Helix 10
AB1
A
189 197Right-handed alpha
Helix 11
AB2
A
201 212Right-handed alpha
Helix 12
AB3
A
220 234Right-handed alpha
Helix 13
AB4
C
19 32Right-handed alpha
Helix 14
AB5
C
45 53Right-handed alpha
Helix 15
AB6
C
65 81Right-handed alpha
Helix 16
AB7
C
98 102Right-handed 310
Helix 17
AB8
C
103 115Right-handed alpha
Helix 18
AB9
C
115 133Right-handed alpha
Helix 19
AC1
C
142 147Right-handed alpha
Helix 20
AC2
C
151 173Right-handed alpha
Helix 21
AC3
C
174 176Right-handed 310
Helix 22
AC4
C
189 198Right-handed alpha
Helix 23
AC5
C
201 212Right-handed alpha
Helix 24
AC6
C
220 234Right-handed alpha
Helix 25
AC7
D
19 32Right-handed alpha
Helix 26
AC8
D
42 53Right-handed alpha
Helix 27
AC9
D
65 81Right-handed alpha
Helix 28
AD1
D
98 102Right-handed 310
Helix 29
AD2
D
103 115Right-handed alpha
Helix 30
AD3
D
115 133Right-handed alpha
Helix 31
AD4
D
142 147Right-handed alpha
Helix 32
AD5
D
151 173Right-handed alpha
Helix 33
AD6
D
174 176Right-handed 310
Helix 34
AD7
D
189 198Right-handed alpha
Helix 35
AD8
D
201 212Right-handed alpha
Helix 36
AD9
D
220 234Right-handed alpha
Helix 37
AE1
F
19 32Right-handed alpha
Helix 38
AE2
F
42 53Right-handed alpha
Helix 39
AE3
F
65 81Right-handed alpha
Helix 40
AE4
F
98 102Right-handed 310
Helix 41
AE5
F
103 115Right-handed alpha
Helix 42
AE6
F
115 133Right-handed alpha
Helix 43
AE7
F
141 147Right-handed alpha
Helix 44
AE8
F
151 173Right-handed alpha
Helix 45
AE9
F
174 176Right-handed 310
Helix 46
AF1
F
189 197Right-handed alpha
Helix 47
AF2
F
201 212Right-handed alpha
Helix 48
AF3
F
220 234Right-handed alpha
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There are 4 sheets in PDB entry 5ICS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
35 40parallel
Strand 3
A
11 15parallel
Strand 4
A
85 88parallel
Strand 5
A
135 139parallel
Strand 6
A
178 184parallel
Strand 7
A
242 245parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
35 40parallel
Strand 3
C
11 15parallel
Strand 4
C
85 88parallel
Strand 5
C
135 139parallel
Strand 6
C
178 184parallel
Strand 7
C
242 245parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 60first strand
Strand 2
D
35 40parallel
Strand 3
D
11 15parallel
Strand 4
D
85 88parallel
Strand 5
D
135 139parallel
Strand 6
D
178 184parallel
Strand 7
D
242 245parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 60first strand
Strand 2
F
35 40parallel
Strand 3
F
11 15parallel
Strand 4
F
85 88parallel
Strand 5
F
135 139parallel
Strand 6
F
178 184parallel
Strand 7
F
242 245parallel
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