Analysis of interatomic Contacts of Structural Units in PDB entry:
5LM4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LM4 entry

There is 1 chain in PDB entry 5LM4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 39ASP 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5LM4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 48Right-handed alpha
Helix 2
AA2
A
48 69Right-handed alpha
Helix 3
AA3
A
74 82Right-handed alpha
Helix 4
AA4
A
82 110Right-handed alpha
Helix 5
AA5
A
112 143Right-handed alpha
Helix 6
AA6
A
172 184Right-handed alpha
Helix 7
AA7
A
187 192Right-handed alpha
Helix 8
AA8
A
222 239Right-handed alpha
Helix 9
AA9
A
240 281Right-handed alpha
Helix 10
AB1
A
296 311Right-handed alpha
Helix 11
AB2
A
311 322Right-handed alpha
Helix 12
AB3
A
324 332Right-handed alpha
Helix 13
AB4
A
332 343Right-handed alpha
Helix 14
AB5
A
348 358Right-handed alpha
Helix 15
AB6
A
363 377Right-handed alpha
Helix 16
AB7
A
379 395Right-handed alpha
Helix 17
AB8
A
403 420Right-handed alpha
Helix 18
AB9
A
425 430Right-handed alpha
Helix 19
AC1
A
430 439Right-handed alpha
Helix 20
AC2
A
441 443Right-handed 310
Helix 21
AC3
A
444 478Right-handed alpha
Helix 22
AC4
A
478 485Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5LM4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
217 219anti-parallel
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