Analysis of interatomic Contacts of Structural Units in PDB entry:
5MGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MGT entry

There are 6 chains in PDB entry 5MGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 73ASP 188
B
 ALA 74ILE 189
C
 GLY 89THR 215
D
 LEU 91THR 215
E
 GLY 90THR 215
F
 LEU 91THR 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5MGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 106Right-handed alpha
Helix 2
AA2
A
115 127Right-handed alpha
Helix 3
AA3
B
95 106Right-handed alpha
Helix 4
AA4
B
115 127Right-handed alpha
Helix 5
AA5
C
114 125Right-handed alpha
Helix 6
AA6
C
134 143Right-handed alpha
Helix 7
AA7
D
114 125Right-handed alpha
Helix 8
AA8
D
134 143Right-handed alpha
Helix 9
AA9
E
114 125Right-handed alpha
Helix 10
AB1
E
134 143Right-handed alpha
Helix 11
AB2
F
114 125Right-handed alpha
Helix 12
AB3
F
134 143Right-handed alpha
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There are 12 sheets in PDB entry 5MGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
85 89anti-parallel
Strand 3
A
181 187anti-parallel
Strand 4
A
131 136parallel
Strand 5
A
144 145anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
181 187anti-parallel
Strand 3
A
131 136parallel
Strand 4
A
163 166anti-parallel
Strand 5
A
171 174anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 82first strand
Strand 2
B
85 89anti-parallel
Strand 3
B
181 187anti-parallel
Strand 4
B
131 136parallel
Strand 5
B
144 145anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
181 187anti-parallel
Strand 3
B
131 136parallel
Strand 4
B
163 167anti-parallel
Strand 5
B
170 174anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 101first strand
Strand 2
C
104 108anti-parallel
Strand 3
C
207 213anti-parallel
Strand 4
C
152 159parallel
Strand 5
C
164 167anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 129first strand
Strand 2
C
207 213anti-parallel
Strand 3
C
152 159parallel
Strand 4
C
188 192anti-parallel
Strand 5
C
197 201anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 101first strand
Strand 2
D
104 108anti-parallel
Strand 3
D
207 213anti-parallel
Strand 4
D
152 158parallel
Strand 5
D
165 167anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 129first strand
Strand 2
D
207 213anti-parallel
Strand 3
D
152 158parallel
Strand 4
D
188 192anti-parallel
Strand 5
D
197 201anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
99 101first strand
Strand 2
E
104 108anti-parallel
Strand 3
E
207 213anti-parallel
Strand 4
E
152 159parallel
Strand 5
E
164 167anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 129first strand
Strand 2
E
207 213anti-parallel
Strand 3
E
152 159parallel
Strand 4
E
188 192anti-parallel
Strand 5
E
197 201anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
99 101first strand
Strand 2
F
104 108anti-parallel
Strand 3
F
207 213anti-parallel
Strand 4
F
152 159parallel
Strand 5
F
164 167anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
128 129first strand
Strand 2
F
207 213anti-parallel
Strand 3
F
152 159parallel
Strand 4
F
188 192anti-parallel
Strand 5
F
197 201anti-parallel
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