Analysis of interatomic Contacts of Structural Units in PDB entry:
5MLG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MLG entry

There is 1 chain in PDB entry 5MLG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7ALA 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5MLG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
29 38Right-handed alpha
Helix 3
AA3
A
98 104Right-handed 310
Helix 4
AA4
A
108 112Right-handed 310
Helix 5
AA5
A
158 163Right-handed alpha
Helix 6
AA6
A
175 183Right-handed 310
Helix 7
AA7
A
185 193Right-handed alpha
Helix 8
AA8
A
222 224Right-handed 310
Helix 9
AA9
A
275 287Right-handed alpha
Helix 10
AB1
A
299 303Right-handed 310
Helix 11
AB2
A
357 363Right-handed alpha
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There are 7 sheets in PDB entry 5MLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 125first strand
Strand 2
A
130 142anti-parallel
Strand 3
A
63 69anti-parallel
Strand 4
A
10 15anti-parallel
Strand 5
A
214 218anti-parallel
Strand 6
A
200 205anti-parallel
Strand 7
A
364 369anti-parallel
Strand 8
A
374 380anti-parallel
Strand 9
A
226 234anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 125first strand
Strand 2
A
130 142anti-parallel
Strand 3
A
145 156anti-parallel
Strand 4
A
87 90parallel
Strand 5
A
169 172anti-parallel
Strand 6
A
74 81parallel
Strand 7
A
63 69anti-parallel
Strand 8
A
10 15anti-parallel
Strand 9
A
214 218anti-parallel
Strand 10
A
200 205anti-parallel
Strand 11
A
364 369anti-parallel
Strand 12
A
374 380anti-parallel
Strand 13
A
226 234anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 256first strand
Strand 2
A
242 250anti-parallel
Strand 3
A
309 313anti-parallel
Strand 4
A
316 320anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 256first strand
Strand 2
A
242 250anti-parallel
Strand 3
A
261 265anti-parallel
Strand 4
A
353 356parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
341 343parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 292first strand
Strand 2
A
295 296anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
338 339anti-parallel
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