Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327332).
This page provides analyses of
contacts formed by:
For analysis of ligandprotein contacts, use:
3D structure can be seen in additional window with
STING software for 5NO6 entry
There are 8 chains in PDB entry 5NO6
(CSU analysis of residue contacts immediately below table)
Chain ID 
Initial residue  Terminal residue 
A

ARG 217  VAL 278 
C

A 20  T 37 
F

A 1  T 18 
B

ARG 217  VAL 278 
D

A 20  T 37 
E

A 1  T 18 
I

TRP 43  GLU 112 
N

GLU 40  GLU 112 
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There are 12
helices in PDB entry 5NO6. Click on helix of interest for
CSU analysis.
Helix number
 Helix ID  Chain ID 
Initial residue  Terminal residue 
Helix class 
Helix 1 
AA1  A
 224 
238  Righthanded alpha 
Helix 2 
AA2  A
 242 
254  Righthanded alpha 
Helix 3 
AA3  A
 256 
274  Righthanded alpha 
Helix 4 
AA4  B
 224 
238  Righthanded alpha 
Helix 5 
AA5  B
 242 
254  Righthanded alpha 
Helix 6 
AA6  B
 256 
275  Righthanded alpha 
Helix 7 
AA7  I
 44 
58  Righthanded alpha 
Helix 8 
AA8  I
 76 
90  Righthanded alpha 
Helix 9 
AA9  I
 94 
110  Righthanded alpha 
Helix 10 
AB1  N
 44 
57  Righthanded alpha 
Helix 11 
AB2  N
 76 
90  Righthanded alpha 
Helix 12 
AB3  N
 94 
111  Righthanded alpha 
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There are no sheets in PDB entry
5NO6
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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