Analysis of interatomic Contacts of Structural Units in PDB entry:
5O6I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O6I entry

There are 9 chains in PDB entry 5O6I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 5HIS 195
C
G 1 G 25
D
C 1 C 25
F
GLU 5ASN 183
G
G 1 G 25
I
C 1 C 25
K
GLU 5ASN 183
L
G 1 G 25
N
C 1 C 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5O6I. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 21Right-handed alpha
Helix 2
AA2
A
44 51Right-handed alpha
Helix 3
AA3
A
51 63Right-handed alpha
Helix 4
AA4
A
84 97Right-handed alpha
Helix 5
AA5
A
98 101Right-handed 310
Helix 6
AA6
A
102 118Right-handed alpha
Helix 7
AA7
A
131 145Right-handed alpha
Helix 8
AA8
A
169 177Right-handed alpha
Helix 9
AA9
A
186 194Right-handed alpha
Helix 10
AB1
F
6 21Right-handed alpha
Helix 11
AB2
F
30 32Right-handed 310
Helix 12
AB3
F
44 51Right-handed alpha
Helix 13
AB4
F
51 64Right-handed alpha
Helix 14
AB5
F
84 97Right-handed alpha
Helix 15
AB6
F
98 101Right-handed 310
Helix 16
AB7
F
102 118Right-handed alpha
Helix 17
AB8
F
131 145Right-handed alpha
Helix 18
AB9
F
169 177Right-handed alpha
Helix 19
AC1
K
6 21Right-handed alpha
Helix 20
AC2
K
44 51Right-handed alpha
Helix 21
AC3
K
51 64Right-handed alpha
Helix 22
AC4
K
84 97Right-handed alpha
Helix 23
AC5
K
98 101Right-handed 310
Helix 24
AC6
K
102 118Right-handed alpha
Helix 25
AC7
K
131 145Right-handed alpha
Helix 26
AC8
K
169 177Right-handed alpha
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There are 6 sheets in PDB entry 5O6I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
22 28first strand
Strand 2
A
34 42anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
69 73anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
125 129first strand
Strand 2
A
160 165anti-parallel
Strand 3
A
149 155anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
22 28first strand
Strand 2
F
34 42anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
69 73anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 129first strand
Strand 2
F
160 165anti-parallel
Strand 3
F
149 155anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
22 28first strand
Strand 2
K
34 42anti-parallel
Strand 3
K
78 83anti-parallel
Strand 4
K
69 73anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
125 129first strand
Strand 2
K
160 165anti-parallel
Strand 3
K
149 155anti-parallel
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