Analysis of interatomic Contacts of Structural Units in PDB entry:
5ON2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ON2 entry

There are 4 chains in PDB entry 5ON2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER -1GLY 860
B
G 1 A 76
D
MET 1GLY 860
E
G 1 A 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 5ON2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
49 69Right-handed alpha
Helix 3
AA3
A
84 94Right-handed alpha
Helix 4
AA4
A
96 116Right-handed alpha
Helix 5
AA5
A
120 124Right-handed 310
Helix 6
AA6
A
129 146Right-handed alpha
Helix 7
AA7
A
195 197Right-handed 310
Helix 8
AA8
A
198 205Right-handed alpha
Helix 9
AA9
A
213 225Right-handed alpha
Helix 10
AB1
A
249 256Right-handed 310
Helix 11
AB2
A
265 272Right-handed alpha
Helix 12
AB3
A
275 285Right-handed alpha
Helix 13
AB4
A
291 298Right-handed alpha
Helix 14
AB5
A
338 341Right-handed 310
Helix 15
AB6
A
342 353Right-handed alpha
Helix 16
AB7
A
384 388Right-handed 310
Helix 17
AB8
A
391 407Right-handed alpha
Helix 18
AB9
A
446 450Right-handed 310
Helix 19
AC1
A
465 470Right-handed alpha
Helix 20
AC2
A
492 497Right-handed alpha
Helix 21
AC3
A
498 503Right-handed alpha
Helix 22
AC4
A
514 522Right-handed alpha
Helix 23
AC5
A
532 534Right-handed 310
Helix 24
AC6
A
535 551Right-handed alpha
Helix 25
AC7
A
630 638Right-handed alpha
Helix 26
AC8
A
638 650Right-handed alpha
Helix 27
AC9
A
662 684Right-handed alpha
Helix 28
AD1
A
695 718Right-handed alpha
Helix 29
AD2
A
721 739Right-handed alpha
Helix 30
AD3
A
743 762Right-handed alpha
Helix 31
AD4
A
765 776Right-handed alpha
Helix 32
AD5
A
821 832Right-handed alpha
Helix 33
AD6
A
832 840Right-handed alpha
Helix 34
AD7
D
6 22Right-handed alpha
Helix 35
AD8
D
49 69Right-handed alpha
Helix 36
AD9
D
83 93Right-handed alpha
Helix 37
AE1
D
96 116Right-handed alpha
Helix 38
AE2
D
120 124Right-handed 310
Helix 39
AE3
D
129 147Right-handed alpha
Helix 40
AE4
D
195 197Right-handed 310
Helix 41
AE5
D
198 205Right-handed alpha
Helix 42
AE6
D
206 208Right-handed 310
Helix 43
AE7
D
213 225Right-handed alpha
Helix 44
AE8
D
249 256Right-handed 310
Helix 45
AE9
D
265 271Right-handed alpha
Helix 46
AF1
D
275 285Right-handed alpha
Helix 47
AF2
D
291 298Right-handed alpha
Helix 48
AF3
D
338 341Right-handed 310
Helix 49
AF4
D
342 353Right-handed alpha
Helix 50
AF5
D
384 388Right-handed 310
Helix 51
AF6
D
391 407Right-handed alpha
Helix 52
AF7
D
465 470Right-handed alpha
Helix 53
AF8
D
491 497Right-handed alpha
Helix 54
AF9
D
498 503Right-handed alpha
Helix 55
AG1
D
514 522Right-handed alpha
Helix 56
AG2
D
532 534Right-handed 310
Helix 57
AG3
D
535 551Right-handed alpha
Helix 58
AG4
D
630 637Right-handed alpha
Helix 59
AG5
D
638 650Right-handed alpha
Helix 60
AG6
D
662 682Right-handed alpha
Helix 61
AG7
D
695 718Right-handed alpha
Helix 62
AG8
D
721 739Right-handed alpha
Helix 63
AG9
D
743 762Right-handed alpha
Helix 64
AH1
D
765 776Right-handed alpha
Helix 65
AH2
D
781 785Right-handed 310
Helix 66
AH3
D
792 796Right-handed 310
Helix 67
AH4
D
821 832Right-handed alpha
Helix 68
AH5
D
832 839Right-handed alpha
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There are 18 sheets in PDB entry 5ON2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
72 74first strand
Strand 2
A
34 39parallel
Strand 3
A
524 530parallel
Strand 4
A
560 566parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
164 165first strand
Strand 2
A
149 159anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
420 421anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
409 415first strand
Strand 2
A
226 236anti-parallel
Strand 3
A
302 310anti-parallel
Strand 4
A
317 323anti-parallel
Strand 5
A
258 261parallel
Strand 6
A
334 337anti-parallel
Strand 7
A
239 247parallel
Strand 8
A
226 236anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
423 424first strand
Strand 2
A
489 490anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
442 444first strand
Strand 2
A
434 437anti-parallel
Strand 3
A
481 485anti-parallel
Strand 4
A
475 478anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
583 586first strand
Strand 2
A
570 577anti-parallel
Strand 3
A
613 619anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
591 595first strand
Strand 2
A
601 606anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
810 816first strand
Strand 2
A
800 806anti-parallel
Strand 3
A
854 859parallel
Strand 4
A
844 850anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
72 74first strand
Strand 2
D
34 39parallel
Strand 3
D
524 530parallel
Strand 4
D
560 566parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
149 155first strand
Strand 2
D
187 193anti-parallel
Strand 3
D
420 421anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
158 159first strand
Strand 2
D
164 165anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
243 247first strand
Strand 2
D
226 236anti-parallel
Strand 3
D
302 310anti-parallel
Strand 4
D
317 323anti-parallel
Strand 5
D
258 261parallel
Strand 6
D
334 337anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
243 247first strand
Strand 2
D
226 236anti-parallel
Strand 3
D
409 415anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
442 444first strand
Strand 2
D
434 437anti-parallel
Strand 3
D
482 485anti-parallel
Strand 4
D
475 477anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
583 586first strand
Strand 2
D
569 577anti-parallel
Strand 3
D
613 619anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
583 586first strand
Strand 2
D
569 577anti-parallel
Strand 3
D
656 657parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
592 595first strand
Strand 2
D
601 605anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
810 817first strand
Strand 2
D
799 806anti-parallel
Strand 3
D
854 859parallel
Strand 4
D
844 850anti-parallel
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