Analysis of interatomic Contacts of Structural Units in PDB entry:
5OQN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OQN entry

There are 4 chains in PDB entry 5OQN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 7ARG 910
B
 MET 383SER 524
C
 G 1 C 18
D
 G 1 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5OQN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 25Right-handed alpha
Helix 2
AA2
A
30 48Right-handed alpha
Helix 3
AA3
A
50 65Right-handed alpha
Helix 4
AA4
A
72 99Right-handed alpha
Helix 5
AA5
A
106 123Right-handed alpha
Helix 6
AA6
A
124 126Right-handed 310
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
152 167Right-handed alpha
Helix 9
AA9
A
171 184Right-handed alpha
Helix 10
AB1
A
206 217Right-handed alpha
Helix 11
AB2
A
219 229Right-handed alpha
Helix 12
AB3
A
236 243Right-handed alpha
Helix 13
AB4
A
244 246Right-handed 310
Helix 14
AB5
A
248 264Right-handed alpha
Helix 15
AB6
A
265 271Right-handed alpha
Helix 16
AB7
A
272 285Right-handed alpha
Helix 17
AB8
A
288 307Right-handed alpha
Helix 18
AB9
A
310 318Right-handed alpha
Helix 19
AC1
A
325 337Right-handed alpha
Helix 20
AC2
A
337 344Right-handed alpha
Helix 21
AC3
A
355 373Right-handed alpha
Helix 22
AC4
A
376 381Right-handed alpha
Helix 23
AC5
A
384 401Right-handed alpha
Helix 24
AC6
A
411 431Right-handed alpha
Helix 25
AC7
A
436 452Right-handed alpha
Helix 26
AC8
A
457 472Right-handed alpha
Helix 27
AC9
A
474 498Right-handed alpha
Helix 28
AD1
A
571 589Right-handed alpha
Helix 29
AD2
A
596 606Right-handed alpha
Helix 30
AD3
A
606 612Right-handed alpha
Helix 31
AD4
A
615 631Right-handed alpha
Helix 32
AD5
A
633 651Right-handed alpha
Helix 33
AD6
A
652 671Right-handed alpha
Helix 34
AD7
A
682 696Right-handed alpha
Helix 35
AD8
A
699 716Right-handed alpha
Helix 36
AD9
A
721 734Right-handed alpha
Helix 37
AE1
A
740 758Right-handed alpha
Helix 38
AE2
A
758 786Right-handed alpha
Helix 39
AE3
A
792 796Right-handed 310
Helix 40
AE4
A
798 810Right-handed alpha
Helix 41
AE5
A
811 815Right-handed 310
Helix 42
AE6
A
826 840Right-handed alpha
Helix 43
AE7
A
844 854Right-handed alpha
Helix 44
AE8
A
855 858Right-handed 310
Helix 45
AE9
A
865 882Right-handed alpha
Helix 46
AF1
A
886 909Right-handed alpha
Helix 47
AF2
B
384 398Right-handed alpha
Helix 48
AF3
B
467 469Right-handed 310
Helix 49
AF4
B
470 475Right-handed alpha
Helix 50
AF5
B
505 511Right-handed alpha
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There are no sheets in PDB entry 5OQN
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