Analysis of interatomic Contacts of Structural Units in PDB entry:
5SZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SZH entry

There are 2 chains in PDB entry 5SZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 531ASP 678
B
 GLY -1MET 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5SZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
531 573Right-handed alpha
Helix 2
AA2
A
582 633Right-handed alpha
Helix 3
AA3
A
634 638Right-handed 310
Helix 4
AA4
A
639 678Right-handed alpha
Helix 5
AA5
B
20 31Right-handed alpha
Helix 6
AA6
B
67 69Right-handed 310
Helix 7
AA7
B
70 76Right-handed alpha
Helix 8
AA8
B
92 98Right-handed alpha
Helix 9
AA9
B
98 110Right-handed alpha
Helix 10
AB1
B
125 129Right-handed 310
Helix 11
AB2
B
132 143Right-handed alpha
Helix 12
AB3
B
157 173Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5SZH.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 52first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
7 15parallel
Strand 4
B
83 89parallel
Strand 5
B
115 121parallel
Strand 6
B
147 149parallel
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