Analysis of interatomic Contacts of Structural Units in PDB entry:
5TIA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TIA entry

There are 4 chains in PDB entry 5TIA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 39MET 381
B
 GLY 39MET 381
C
 GLY 39HIS 391
D
 GLY 39LEU 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 5TIA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 46Right-handed alpha
Helix 2
AA2
A
47 52Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
67 99Right-handed alpha
Helix 5
AA5
A
100 106Right-handed 310
Helix 6
AA6
A
107 128Right-handed alpha
Helix 7
AA7
A
128 133Right-handed alpha
Helix 8
AA8
A
136 141Right-handed alpha
Helix 9
AA9
A
142 147Right-handed 310
Helix 10
AB1
A
151 154Right-handed 310
Helix 11
AB2
A
155 166Right-handed alpha
Helix 12
AB3
A
173 178Right-handed alpha
Helix 13
AB4
A
185 198Right-handed alpha
Helix 14
AB5
A
200 211Right-handed alpha
Helix 15
AB6
A
221 244Right-handed alpha
Helix 16
AB7
A
252 267Right-handed alpha
Helix 17
AB8
A
269 277Right-handed alpha
Helix 18
AB9
A
285 298Right-handed alpha
Helix 19
AC1
A
301 337Right-handed alpha
Helix 20
AC2
A
347 353Right-handed alpha
Helix 21
AC3
A
354 355Right-handed 310
Helix 22
AC4
A
356 360Right-handed 310
Helix 23
AC5
A
362 368Right-handed alpha
Helix 24
AC6
A
369 372Right-handed 310
Helix 25
AC7
A
374 378Right-handed 310
Helix 26
AC8
B
41 46Right-handed alpha
Helix 27
AC9
B
47 52Right-handed alpha
Helix 28
AD1
B
57 62Right-handed alpha
Helix 29
AD2
B
68 99Right-handed alpha
Helix 30
AD3
B
100 106Right-handed 310
Helix 31
AD4
B
107 133Right-handed alpha
Helix 32
AD5
B
136 145Right-handed alpha
Helix 33
AD6
B
151 154Right-handed 310
Helix 34
AD7
B
155 166Right-handed alpha
Helix 35
AD8
B
180 184Right-handed 310
Helix 36
AD9
B
185 198Right-handed alpha
Helix 37
AE1
B
200 211Right-handed alpha
Helix 38
AE2
B
221 244Right-handed alpha
Helix 39
AE3
B
247 267Right-handed alpha
Helix 40
AE4
B
269 279Right-handed alpha
Helix 41
AE5
B
285 298Right-handed alpha
Helix 42
AE6
B
301 337Right-handed alpha
Helix 43
AE7
B
347 354Right-handed alpha
Helix 44
AE8
B
355 360Right-handed 310
Helix 45
AE9
B
362 368Right-handed alpha
Helix 46
AF1
B
369 372Right-handed 310
Helix 47
AF2
B
374 378Right-handed 310
Helix 48
AF3
C
41 46Right-handed alpha
Helix 49
AF4
C
47 52Right-handed alpha
Helix 50
AF5
C
68 99Right-handed alpha
Helix 51
AF6
C
100 106Right-handed 310
Helix 52
AF7
C
107 133Right-handed alpha
Helix 53
AF8
C
136 141Right-handed alpha
Helix 54
AF9
C
142 147Right-handed 310
Helix 55
AG1
C
151 154Right-handed 310
Helix 56
AG2
C
155 166Right-handed alpha
Helix 57
AG3
C
180 185Right-handed 310
Helix 58
AG4
C
186 198Right-handed alpha
Helix 59
AG5
C
200 211Right-handed alpha
Helix 60
AG6
C
221 237Right-handed alpha
Helix 61
AG7
C
258 266Right-handed alpha
Helix 62
AG8
C
269 279Right-handed alpha
Helix 63
AG9
C
285 298Right-handed alpha
Helix 64
AH1
C
301 303Right-handed 310
Helix 65
AH2
C
304 337Right-handed alpha
Helix 66
AH3
C
347 355Right-handed alpha
Helix 67
AH4
C
356 360Right-handed 310
Helix 68
AH5
C
362 368Right-handed alpha
Helix 69
AH6
C
369 372Right-handed 310
Helix 70
AH7
C
374 378Right-handed 310
Helix 71
AH8
C
382 389Right-handed alpha
Helix 72
AH9
D
41 46Right-handed alpha
Helix 73
AI1
D
47 52Right-handed alpha
Helix 74
AI2
D
59 63Right-handed 310
Helix 75
AI3
D
68 99Right-handed alpha
Helix 76
AI4
D
100 106Right-handed 310
Helix 77
AI5
D
107 133Right-handed alpha
Helix 78
AI6
D
136 142Right-handed alpha
Helix 79
AI7
D
143 147Right-handed 310
Helix 80
AI8
D
151 154Right-handed 310
Helix 81
AI9
D
155 166Right-handed alpha
Helix 82
AJ1
D
179 184Right-handed 310
Helix 83
AJ2
D
185 198Right-handed alpha
Helix 84
AJ3
D
200 210Right-handed alpha
Helix 85
AJ4
D
221 242Right-handed alpha
Helix 86
AJ5
D
249 267Right-handed alpha
Helix 87
AJ6
D
269 279Right-handed alpha
Helix 88
AJ7
D
285 298Right-handed alpha
Helix 89
AJ8
D
301 303Right-handed 310
Helix 90
AJ9
D
304 337Right-handed alpha
Helix 91
AK1
D
347 354Right-handed alpha
Helix 92
AK2
D
355 360Right-handed 310
Helix 93
AK3
D
362 368Right-handed alpha
Helix 94
AK4
D
369 372Right-handed 310
Helix 95
AK5
D
374 378Right-handed 310
Helix 96
AK6
D
382 389Right-handed alpha
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There are no sheets in PDB entry 5TIA
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