Analysis of interatomic Contacts of Structural Units in PDB entry:
5TLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TLJ entry

There are 9 chains in PDB entry 5TLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 1ARG 215
B
VAL 2PRO 220
C
ASP 1ARG 215
D
GLU 1PRO 217
E
ASP 1ARG 215
F
VAL 2PRO 220
G
ASP 1ARG 215
H
GLU 1PRO 217
X
LYS 5CYS 84
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5TLJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
83 87Right-handed 310
Helix 2
AA2
A
125 130Right-handed alpha
Helix 3
AA3
A
187 191Right-handed alpha
Helix 4
AA4
B
62 65Right-handed 310
Helix 5
AA5
B
194 196Right-handed 310
Helix 6
AA6
C
125 131Right-handed alpha
Helix 7
AA7
C
187 191Right-handed alpha
Helix 8
AA8
D
87 91Right-handed 310
Helix 9
AA9
E
187 192Right-handed alpha
Helix 10
AB1
F
28 32Right-handed 310
Helix 11
AB2
F
192 196Right-handed 310
Helix 12
AB3
G
125 130Right-handed alpha
Helix 13
AB4
G
187 192Right-handed alpha
Helix 14
AB5
H
28 32Right-handed 310
Helix 15
AB6
H
87 91Right-handed 310
Helix 16
AB7
H
158 162Right-handed 310
Helix 17
AB8
H
191 196Right-handed alpha
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There are 50 sheets in PDB entry 5TLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 7first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
66 71anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 14first strand
Strand 2
A
107 111parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
30 31first strand
Strand 2
A
34 35anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
57 58first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
37 42anti-parallel
Strand 4
A
89 94anti-parallel
Strand 5
A
101 102anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 122first strand
Strand 2
A
133 143anti-parallel
Strand 3
A
177 186anti-parallel
Strand 4
A
165 167anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
149 154first strand
Strand 2
A
195 201anti-parallel
Strand 3
A
209 214anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 6first strand
Strand 2
B
15 25anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
114 118parallel
Strand 3
B
93 98anti-parallel
Strand 4
B
34 40anti-parallel
Strand 5
B
44 51anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
114 118parallel
Strand 3
B
93 98anti-parallel
Strand 4
B
109 110anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
129 131first strand
Strand 2
B
142 152anti-parallel
Strand 3
B
183 192anti-parallel
Strand 4
B
170 172anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
129 131first strand
Strand 2
B
142 152anti-parallel
Strand 3
B
183 192anti-parallel
Strand 4
B
176 177anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
157 158first strand
Strand 2
B
203 207anti-parallel
Strand 3
B
212 216anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
4 7first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
74 79anti-parallel
Strand 4
C
66 71anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
10 14first strand
Strand 2
C
107 111parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
30 31first strand
Strand 2
C
34 35anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
57 58first strand
Strand 2
C
49 53anti-parallel
Strand 3
C
37 41anti-parallel
Strand 4
C
92 94anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
118 122first strand
Strand 2
C
133 143anti-parallel
Strand 3
C
177 186anti-parallel
Strand 4
C
163 167anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
149 154first strand
Strand 2
C
196 201anti-parallel
Strand 3
C
209 213anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 7first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
11 12first strand
Strand 2
D
114 115parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
58 59first strand
Strand 2
D
45 51anti-parallel
Strand 3
D
33 39anti-parallel
Strand 4
D
93 99anti-parallel
Strand 5
D
104 107anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
58 59first strand
Strand 2
D
45 51anti-parallel
Strand 3
D
33 39anti-parallel
Strand 4
D
93 99anti-parallel
Strand 5
D
111 112anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
124 128first strand
Strand 2
D
139 149anti-parallel
Strand 3
D
180 189anti-parallel
Strand 4
D
167 169anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
124 128first strand
Strand 2
D
139 149anti-parallel
Strand 3
D
180 189anti-parallel
Strand 4
D
173 174anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
154 158first strand
Strand 2
D
199 204anti-parallel
Strand 3
D
209 214anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
4 7first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
74 79anti-parallel
Strand 4
E
66 71anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
10 14first strand
Strand 2
E
106 111parallel
Strand 3
E
89 94anti-parallel
Strand 4
E
37 42anti-parallel
Strand 5
E
49 50anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
30 31first strand
Strand 2
E
34 35anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
52 53first strand
Strand 2
E
57 58anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
118 121first strand
Strand 2
E
138 143anti-parallel
Strand 3
E
177 181anti-parallel
Strand 4
E
165 167anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
133 135first strand
Strand 2
E
184 186anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
157 158first strand
Strand 2
E
149 154anti-parallel
Strand 3
E
196 201anti-parallel
Strand 4
E
210 213anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 6first strand
Strand 2
F
17 25anti-parallel
Strand 3
F
78 84anti-parallel
Strand 4
F
68 71anti-parallel
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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
115 118parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
34 40anti-parallel
Strand 5
F
44 47anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
127 131first strand
Strand 2
F
143 152anti-parallel
Strand 3
F
183 191anti-parallel
Strand 4
F
170 172anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
127 131first strand
Strand 2
F
143 152anti-parallel
Strand 3
F
183 191anti-parallel
Strand 4
F
176 177anti-parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
159 161first strand
Strand 2
F
201 207anti-parallel
Strand 3
F
212 218anti-parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
4 7first strand
Strand 2
G
22 25anti-parallel
Strand 3
G
74 75anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
10 14first strand
Strand 2
G
106 111parallel
Strand 3
G
89 91anti-parallel
Strand 4
G
40 42anti-parallel
Strand 5
G
48 50anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
52 53first strand
Strand 2
G
57 58anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
66 67first strand
Strand 2
G
78 79anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
118 122first strand
Strand 2
G
133 141anti-parallel
Strand 3
G
178 186anti-parallel
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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
157 158first strand
Strand 2
G
149 154anti-parallel
Strand 3
G
196 201anti-parallel
Strand 4
G
209 213anti-parallel
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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
11 12first strand
Strand 2
H
111 115parallel
Strand 3
H
92 97anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 59anti-parallel
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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
124 128first strand
Strand 2
H
139 149anti-parallel
Strand 3
H
180 189anti-parallel
Strand 4
H
173 174anti-parallel
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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
154 155first strand
Strand 2
H
199 204anti-parallel
Strand 3
H
209 214anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
11 13first strand
Strand 2
X
19 21anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
27 29first strand
Strand 2
X
42 44anti-parallel
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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
50 51first strand
Strand 2
X
62 63anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il