Analysis of interatomic Contacts of Structural Units in PDB entry:
5TPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TPT entry

There are 2 chains in PDB entry 5TPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 373ARG 569
B
 HIS 387GLU 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5TPT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
373 378Right-handed alpha
Helix 2
AA2
A
385 418Right-handed alpha
Helix 3
AA3
A
423 481Right-handed alpha
Helix 4
AA4
A
485 518Right-handed alpha
Helix 5
AA5
A
518 546Right-handed alpha
Helix 6
AA6
A
547 549Right-handed 310
Helix 7
AA7
A
550 557Right-handed alpha
Helix 8
AA8
A
557 567Right-handed alpha
Helix 9
AA9
B
388 418Right-handed alpha
Helix 10
AB1
B
423 480Right-handed alpha
Helix 11
AB2
B
485 518Right-handed alpha
Helix 12
AB3
B
518 546Right-handed alpha
Helix 13
AB4
B
550 557Right-handed alpha
Helix 14
AB5
B
557 566Right-handed alpha
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There are no sheets in PDB entry 5TPT
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