Analysis of interatomic Contacts of Structural Units in PDB entry:
5TW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TW1 entry

There are 11 chains in PDB entry 5TW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
PRO 26LYS 108
A
MET 1LEU 221
B
MET 1GLU 233
C
ASN 21ARG 1139
D
VAL 4ALA 1283
E
SER 24GLY 106
F
ALA 163ASP 466
O
G 1 T 31
P
A 1 C 26
T
ILE 251GLN 303
G
UNK 140UNK 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are126 helices in PDB entry 5TW1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
J
80 87Right-handed alpha
Helix 2
AA2
J
90 107Right-handed alpha
Helix 3
AA3
A
30 46Right-handed alpha
Helix 4
AA4
A
72 82Right-handed alpha
Helix 5
AA5
A
108 110Right-handed 310
Helix 6
AA6
A
203 219Right-handed alpha
Helix 7
AA7
B
29 45Right-handed alpha
Helix 8
AA8
B
72 82Right-handed alpha
Helix 9
AA9
B
203 224Right-handed alpha
Helix 10
AB1
C
45 57Right-handed alpha
Helix 11
AB2
C
58 68Right-handed alpha
Helix 12
AB3
C
75 85Right-handed alpha
Helix 13
AB4
C
109 117Right-handed alpha
Helix 14
AB5
C
224 230Right-handed alpha
Helix 15
AB6
C
235 244Right-handed alpha
Helix 16
AB7
C
246 256Right-handed alpha
Helix 17
AB8
C
260 273Right-handed alpha
Helix 18
AB9
C
279 291Right-handed alpha
Helix 19
AC1
C
300 311Right-handed alpha
Helix 20
AC2
C
325 341Right-handed alpha
Helix 21
AC3
C
363 365Right-handed 310
Helix 22
AC4
C
371 398Right-handed alpha
Helix 23
AC5
C
404 409Right-handed alpha
Helix 24
AC6
C
411 423Right-handed alpha
Helix 25
AC7
C
435 443Right-handed alpha
Helix 26
AC8
C
460 465Right-handed alpha
Helix 27
AC9
C
467 471Right-handed 310
Helix 28
AD1
C
523 528Right-handed alpha
Helix 29
AD2
C
581 585Right-handed 310
Helix 30
AD3
C
587 591Right-handed 310
Helix 31
AD4
C
592 604Right-handed alpha
Helix 32
AD5
C
621 628Right-handed alpha
Helix 33
AD6
C
730 735Right-handed alpha
Helix 34
AD7
C
770 775Right-handed 310
Helix 35
AD8
C
806 817Right-handed alpha
Helix 36
AD9
C
911 916Right-handed alpha
Helix 37
AE1
C
919 934Right-handed alpha
Helix 38
AE2
C
945 950Right-handed 310
Helix 39
AE3
C
972 981Right-handed alpha
Helix 40
AE4
C
1027 1032Right-handed alpha
Helix 41
AE5
C
1060 1071Right-handed alpha
Helix 42
AE6
C
1072 1081Right-handed alpha
Helix 43
AE7
C
1086 1099Right-handed alpha
Helix 44
AE8
C
1109 1121Right-handed alpha
Helix 45
AE9
D
16 23Right-handed alpha
Helix 46
AF1
D
86 91Right-handed alpha
Helix 47
AF2
D
103 109Right-handed alpha
Helix 48
AF3
D
112 119Right-handed alpha
Helix 49
AF4
D
121 130Right-handed alpha
Helix 50
AF5
D
140 147Right-handed alpha
Helix 51
AF6
D
147 187Right-handed alpha
Helix 52
AF7
D
190 229Right-handed alpha
Helix 53
AF8
D
238 247Right-handed alpha
Helix 54
AF9
D
248 250Right-handed 310
Helix 55
AG1
D
256 267Right-handed alpha
Helix 56
AG2
D
269 284Right-handed alpha
Helix 57
AG3
D
286 305Right-handed alpha
Helix 58
AG4
D
308 311Right-handed 310
Helix 59
AG5
D
321 325Right-handed 310
Helix 60
AG6
D
338 361Right-handed alpha
Helix 61
AG7
D
363 383Right-handed alpha
Helix 62
AG8
D
393 397Right-handed 310
Helix 63
AG9
D
401 407Right-handed alpha
Helix 64
AH1
D
411 417Right-handed alpha
Helix 65
AH2
D
445 463Right-handed alpha
Helix 66
AH3
D
468 478Right-handed alpha
Helix 67
AH4
D
482 492Right-handed alpha
Helix 68
AH5
D
505 507Right-handed 310
Helix 69
AH6
D
528 533Right-handed alpha
Helix 70
AH7
D
548 558Right-handed alpha
Helix 71
AH8
D
560 564Right-handed 310
Helix 72
AH9
D
579 590Right-handed alpha
Helix 73
AI1
D
614 624Right-handed alpha
Helix 74
AI2
D
644 651Right-handed alpha
Helix 75
AI3
D
666 674Right-handed alpha
Helix 76
AI4
D
688 703Right-handed alpha
Helix 77
AI5
D
704 726Right-handed alpha
Helix 78
AI6
D
740 761Right-handed alpha
Helix 79
AI7
D
765 792Right-handed alpha
Helix 80
AI8
D
796 804Right-handed alpha
Helix 81
AI9
D
809 817Right-handed alpha
Helix 82
AJ1
D
844 881Right-handed alpha
Helix 83
AJ2
D
944 955Right-handed alpha
Helix 84
AJ3
D
975 979Right-handed alpha
Helix 85
AJ4
D
993 1004Right-handed alpha
Helix 86
AJ5
D
1005 1009Right-handed 310
Helix 87
AJ6
D
1028 1037Right-handed alpha
Helix 88
AJ7
D
1082 1086Right-handed 310
Helix 89
AJ8
D
1118 1127Right-handed alpha
Helix 90
AJ9
D
1127 1146Right-handed alpha
Helix 91
AK1
D
1151 1163Right-handed alpha
Helix 92
AK2
D
1184 1193Right-handed alpha
Helix 93
AK3
D
1210 1217Right-handed alpha
Helix 94
AK4
D
1220 1228Right-handed alpha
Helix 95
AK5
D
1229 1241Right-handed alpha
Helix 96
AK6
D
1248 1256Right-handed alpha
Helix 97
AK7
D
1261 1264Right-handed 310
Helix 98
AK8
D
1265 1270Right-handed alpha
Helix 99
AK9
D
1276 1283Right-handed alpha
Helix 100
AL1
E
30 34Right-handed 310
Helix 101
AL2
E
36 42Right-handed alpha
Helix 102
AL3
E
46 65Right-handed alpha
Helix 103
AL4
E
87 98Right-handed alpha
Helix 104
AL5
F
164 175Right-handed alpha
Helix 105
AL6
F
180 208Right-handed alpha
Helix 106
AL7
F
212 246Right-handed alpha
Helix 107
AL8
F
247 249Right-handed 310
Helix 108
AL9
F
254 273Right-handed alpha
Helix 109
AM1
F
280 301Right-handed alpha
Helix 110
AM2
F
307 329Right-handed alpha
Helix 111
AM3
F
333 341Right-handed alpha
Helix 112
AM4
F
344 355Right-handed alpha
Helix 113
AM5
F
372 377Right-handed 310
Helix 114
AM6
F
384 404Right-handed alpha
Helix 115
AM7
F
406 418Right-handed alpha
Helix 116
AM8
F
426 435Right-handed alpha
Helix 117
AM9
F
437 454Right-handed alpha
Helix 118
AN1
F
454 459Right-handed alpha
Helix 119
AN2
F
460 465Right-handed 310
Helix 120
AN3
T
251 255Right-handed 310
Helix 121
AN4
T
257 268Right-handed alpha
Helix 122
AN5
T
271 278Right-handed alpha
Helix 123
AN6
T
279 285Right-handed alpha
Helix 124
AN7
T
290 303Right-handed alpha
Helix 125
AN8
G
146 148Right-handed 310
Helix 126
AN9
G
149 155Right-handed alpha
Back to top of page

There are 39 sheets in PDB entry 5TW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
39 45first strand
Strand 2
J
27 34anti-parallel
Strand 3
J
62 64anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
8 10first strand
Strand 2
A
18 26anti-parallel
Strand 3
A
190 198anti-parallel
Strand 4
A
171 180anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 100first strand
Strand 2
A
133 147anti-parallel
Strand 3
A
47 56anti-parallel
Strand 4
A
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 100first strand
Strand 2
A
133 147anti-parallel
Strand 3
A
166 168anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
85 87first strand
Strand 2
A
116 118anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
103 106first strand
Strand 2
A
124 128anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
8 13first strand
Strand 2
B
18 24anti-parallel
Strand 3
B
189 198anti-parallel
Strand 4
B
171 181anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
93 100first strand
Strand 2
B
133 143anti-parallel
Strand 3
B
48 56anti-parallel
Strand 4
B
161 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
85 87first strand
Strand 2
B
116 118anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
103 106first strand
Strand 2
B
124 128anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
146 147first strand
Strand 2
B
166 167anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
29 31first strand
Strand 2
C
962 964parallel
Strand 3
C
617 618parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
87 88first strand
Strand 2
C
94 103anti-parallel
Strand 3
C
121 132anti-parallel
Strand 4
C
138 149anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
157 159first strand
Strand 2
C
162 166anti-parallel
Strand 3
C
428 430anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
367 370first strand
Strand 2
C
168 172anti-parallel
Strand 3
C
445 447parallel
Strand 4
C
488 490anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
175 178first strand
Strand 2
C
193 196anti-parallel
Strand 3
C
203 205anti-parallel
Strand 4
C
216 217anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
345 346first strand
Strand 2
C
354 355anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
496 497first strand
Strand 2
C
503 511anti-parallel
Strand 3
C
514 522anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
496 497first strand
Strand 2
C
503 511anti-parallel
Strand 3
C
569 571anti-parallel
Strand 4
C
532 533parallel
Strand 5
C
549 553anti-parallel
Strand 6
C
559 563anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
633 634first strand
Strand 2
C
692 695anti-parallel
Strand 3
C
678 679anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
658 662first strand
Strand 2
C
648 653anti-parallel
Strand 3
C
639 644anti-parallel
Strand 4
C
686 687anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
699 700first strand
Strand 2
C
703 704anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
998 999first strand
Strand 2
C
1014 1023anti-parallel
Strand 3
C
875 878anti-parallel
Strand 4
C
883 890anti-parallel
Strand 5
C
726 729parallel
Strand 6
C
906 908anti-parallel
Strand 7
C
707 713parallel
Strand 8
C
1014 1023anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
756 757first strand
Strand 2
C
740 753anti-parallel
Strand 3
C
856 868anti-parallel
Strand 4
C
836 845anti-parallel
Strand 5
C
786 787anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
759 760first strand
Strand 2
C
796 799anti-parallel
Strand 3
C
823 825anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
792 794first strand
Strand 2
C
828 829anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1033 1035first strand
Strand 2
D
425 432anti-parallel
Strand 3
D
540 544anti-parallel
Strand 4
D
496 499anti-parallel
Strand 5
D
509 517anti-parallel
Strand 6
D
440 444parallel
Strand 7
D
522 524anti-parallel
Strand 8
D
425 432parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1057 1059first strand
Strand 2
D
420 422anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1135 1136first strand
Strand 2
C
1127 1129anti-parallel
Strand 3
D
10 11anti-parallel
Strand 4
D
1243 1244anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
24 27first strand
Strand 2
D
92 102parallel
Strand 3
D
313 319anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
234 235first strand
Strand 2
D
134 139anti-parallel
Strand 3
D
252 255anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
327 329first strand
Strand 2
D
335 337anti-parallel
Strand 3
F
359 360parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
611 612first strand
Strand 2
D
634 637parallel
Strand 3
D
661 664anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
885 887first strand
Strand 2
D
973 974parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
896 898first strand
Strand 2
D
959 961anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1044 1045first strand
Strand 2
D
1116 1117parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1076 1078first strand
Strand 2
D
1063 1069anti-parallel
Strand 3
D
1052 1058anti-parallel
Strand 4
D
1105 1106anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1181 1183first strand
Strand 2
D
1165 1168anti-parallel
Strand 3
D
1204 1207anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1272 1275first strand
Strand 2
E
101 104anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il