Analysis of interatomic Contacts of Structural Units in PDB entry:
5UAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UAU entry

There are 5 chains in PDB entry 5UAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLN 274
B
PHE -2GLN 274
C
SER 0GLN 274
D
MET 1GLU 275
E
MET 1GLN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 5UAU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
26 28Right-handed 310
Helix 3
AA3
A
39 49Right-handed alpha
Helix 4
AA4
A
55 63Right-handed alpha
Helix 5
AA5
A
71 73Right-handed 310
Helix 6
AA6
A
74 83Right-handed alpha
Helix 7
AA7
A
84 86Right-handed 310
Helix 8
AA8
A
100 110Right-handed alpha
Helix 9
AA9
A
123 129Right-handed 310
Helix 10
AB1
A
142 155Right-handed alpha
Helix 11
AB2
A
163 165Right-handed 310
Helix 12
AB3
A
166 174Right-handed alpha
Helix 13
AB4
A
176 195Right-handed alpha
Helix 14
AB5
A
198 219Right-handed alpha
Helix 15
AB6
A
223 232Right-handed alpha
Helix 16
AB7
A
236 248Right-handed alpha
Helix 17
AB8
A
249 274Right-handed alpha
Helix 18
AB9
B
9 22Right-handed alpha
Helix 19
AC1
B
26 28Right-handed 310
Helix 20
AC2
B
39 49Right-handed alpha
Helix 21
AC3
B
55 63Right-handed alpha
Helix 22
AC4
B
71 73Right-handed 310
Helix 23
AC5
B
74 83Right-handed alpha
Helix 24
AC6
B
84 86Right-handed 310
Helix 25
AC7
B
100 110Right-handed alpha
Helix 26
AC8
B
123 129Right-handed 310
Helix 27
AC9
B
142 155Right-handed alpha
Helix 28
AD1
B
163 165Right-handed 310
Helix 29
AD2
B
166 174Right-handed alpha
Helix 30
AD3
B
176 195Right-handed alpha
Helix 31
AD4
B
198 220Right-handed alpha
Helix 32
AD5
B
223 232Right-handed alpha
Helix 33
AD6
B
236 248Right-handed alpha
Helix 34
AD7
B
249 274Right-handed alpha
Helix 35
AD8
C
9 22Right-handed alpha
Helix 36
AD9
C
26 28Right-handed 310
Helix 37
AE1
C
42 49Right-handed alpha
Helix 38
AE2
C
55 63Right-handed alpha
Helix 39
AE3
C
71 73Right-handed 310
Helix 40
AE4
C
74 83Right-handed alpha
Helix 41
AE5
C
84 86Right-handed 310
Helix 42
AE6
C
100 110Right-handed alpha
Helix 43
AE7
C
123 129Right-handed 310
Helix 44
AE8
C
142 155Right-handed alpha
Helix 45
AE9
C
163 165Right-handed 310
Helix 46
AF1
C
166 174Right-handed alpha
Helix 47
AF2
C
176 195Right-handed alpha
Helix 48
AF3
C
198 220Right-handed alpha
Helix 49
AF4
C
223 232Right-handed alpha
Helix 50
AF5
C
236 248Right-handed alpha
Helix 51
AF6
C
249 274Right-handed alpha
Helix 52
AF7
D
9 22Right-handed alpha
Helix 53
AF8
D
26 28Right-handed 310
Helix 54
AF9
D
39 49Right-handed alpha
Helix 55
AG1
D
55 63Right-handed alpha
Helix 56
AG2
D
71 73Right-handed 310
Helix 57
AG3
D
74 83Right-handed alpha
Helix 58
AG4
D
84 86Right-handed 310
Helix 59
AG5
D
100 110Right-handed alpha
Helix 60
AG6
D
123 129Right-handed 310
Helix 61
AG7
D
142 155Right-handed alpha
Helix 62
AG8
D
163 165Right-handed 310
Helix 63
AG9
D
166 174Right-handed alpha
Helix 64
AH1
D
176 195Right-handed alpha
Helix 65
AH2
D
198 220Right-handed alpha
Helix 66
AH3
D
223 232Right-handed alpha
Helix 67
AH4
D
236 248Right-handed alpha
Helix 68
AH5
D
249 275Right-handed alpha
Helix 69
AH6
E
9 22Right-handed alpha
Helix 70
AH7
E
26 28Right-handed 310
Helix 71
AH8
E
55 63Right-handed alpha
Helix 72
AH9
E
71 73Right-handed 310
Helix 73
AI1
E
74 83Right-handed alpha
Helix 74
AI2
E
84 86Right-handed 310
Helix 75
AI3
E
100 110Right-handed alpha
Helix 76
AI4
E
123 129Right-handed 310
Helix 77
AI5
E
142 155Right-handed alpha
Helix 78
AI6
E
163 165Right-handed 310
Helix 79
AI7
E
166 174Right-handed alpha
Helix 80
AI8
E
176 195Right-handed alpha
Helix 81
AI9
E
198 219Right-handed alpha
Helix 82
AJ1
E
223 232Right-handed alpha
Helix 83
AJ2
E
236 248Right-handed alpha
Helix 84
AJ3
E
249 274Right-handed alpha
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There are 5 sheets in PDB entry 5UAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
51 53first strand
Strand 2
A
30 33parallel
Strand 3
A
3 6parallel
Strand 4
A
65 68parallel
Strand 5
A
91 94parallel
Strand 6
A
117 121parallel
Strand 7
A
131 137anti-parallel
Strand 8
A
157 161parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
51 53first strand
Strand 2
B
30 33parallel
Strand 3
B
3 6parallel
Strand 4
B
65 68parallel
Strand 5
B
91 94parallel
Strand 6
B
116 121parallel
Strand 7
B
131 137anti-parallel
Strand 8
B
157 161parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
51 53first strand
Strand 2
C
30 33parallel
Strand 3
C
3 6parallel
Strand 4
C
65 68parallel
Strand 5
C
91 94parallel
Strand 6
C
117 121parallel
Strand 7
C
131 137anti-parallel
Strand 8
C
157 161parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
51 53first strand
Strand 2
D
30 33parallel
Strand 3
D
3 6parallel
Strand 4
D
65 68parallel
Strand 5
D
91 94parallel
Strand 6
D
116 121parallel
Strand 7
D
131 137anti-parallel
Strand 8
D
157 161parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
51 53first strand
Strand 2
E
30 33parallel
Strand 3
E
3 6parallel
Strand 4
E
65 68parallel
Strand 5
E
91 94parallel
Strand 6
E
117 121parallel
Strand 7
E
131 137anti-parallel
Strand 8
E
157 161parallel
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